RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CITED1Q99966 193 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 TSGA10Q9BZW7 698 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 Q9H3A6 140 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ZNF702PQ9H963 129 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 UCK1Q9HA47 277 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 CYP3A43Q9HB55 503 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 MRPL47Q9HD33 250 aaKnown RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 KCNMB3Q9NPA1 279 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 TUBG2Q9NRH3 451 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 FKBP14Q9NWM8 211 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 MBD2Q9UBB5 411 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 FZR1Q9UM11 496 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 DDX19BQ9UMR2 479 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 KIF27Q86VH2 1401 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 CARMIL1Q5VZK9 1371 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 SMARCA2P51531 1590 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 PINLYPA6NC86 204 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 HELTA6NFD8 242 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 SUPT3HB4E1H0 165 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 LGALS8O00214 317 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 NDUFAB1O14561 156 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 OR7A17O14581 309 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 ALOX15BO15296 676 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 LANCL1O43813 399 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 TBX19O60806 448 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 ATP5HO75947 161 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 CXCL14O95715 111 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 IGHV3-23P01764 117 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 CSF2P04141 144 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 CRYGCP07315 174 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 HOXC4P09017 264 aaPredicted RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 IQCF3P0C7M6 154 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 PABPC4LP0CB38 370 aaKnown RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 NR2C1P13056 603 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 RPA2P15927 270 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 ZNF32P17041 273 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 NCF2P19878 526 aaPredicted RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 CYP2B6P20813 491 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 DRD5P21918 477 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 CD1BP29016 333 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 HOXA6P31267 233 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 AKT2P31751 481 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 SYKP43405 635 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 TUFMP49411 452 aaKnown RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 SUCLG1P53597 346 aaKnown RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 CRYBB1P53674 252 aaPredicted RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 ATP5IP56385 69 aaPredicted RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 RIPPLY3P57055 190 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 SRP54P61011 504 aaKnown RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 VBP1P61758 197 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 RPL32P62910 135 aaKnown RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 SRYQ05066 204 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 PDZK1IP1Q13113 114 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 DMC1Q14565 340 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 PON2Q15165 354 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 BCL2A1Q16548 175 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 ZNF658BQ4V348 819 aaPredicted RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 HIKESHIQ53FT3 197 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 AGBL2Q5U5Z8 902 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 LIPKQ5VXJ0 399 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 OTPQ5XKR4 325 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 UFSP1Q6NVU6 142 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 PNCKQ6P2M8 343 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 IGFL2Q6UWQ7 119 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 NANOGNBQ7Z5D8 188 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 YRDCQ86U90 279 aaKnown RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 BIVMQ86UB2 503 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 VPS36Q86VN1 386 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 CDR2LQ86X02 465 aaPredicted RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 ZDHHC21Q8IVQ6 265 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 LRRC17Q8N6Y2 441 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 ASCC1Q8N9N2 400 aaKnown RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 SPATA4Q8NEY3 305 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 OR10H4Q8NGA5 316 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 RASD2Q96D21 266 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 CYTH2Q99418 400 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 API5Q9BZZ5 524 aaKnown RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 LRRC19Q9H756 370 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 NTN4Q9HB63 628 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 FARSBQ9NSD9 589 aaKnown RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 STARD5Q9NSY2 213 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 IL20RAQ9UHF4 553 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 PACSIN2Q9UNF0 486 aaPredicted RBP2.25□□□□□ -2.05
SPG11-206ENST00000558093 SLC22A14Q9Y267 594 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 MFHAS1Q9Y4C4 1052 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 TIMM22Q9Y584 194 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 MAB21L2Q9Y586 359 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 CHD4Q14839 1912 aa2.25□□□□□ -2.05
SPG11-206ENST00000558093 NPC1L1Q9UHC9 1359 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 GRIN2DO15399 1336 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 UBE4BO95155 1302 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 TRBV2A0A0J9YWF9 115 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 TMEM120BA0PK00 339 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ARHGEF35A5YM69 484 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 OR2AG2A6NM03 316 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 C12orf71A8MTZ7 269 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 PSMD11O00231 422 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 HIP1O00291 1037 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 CHADO15335 359 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 SSX5O60225 188 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms