RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 FRAT2O75474 233 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 ALDOBP05062 364 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 LGALS2P05162 132 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 NGFRP08138 427 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 ANXA5P08758 320 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 UMPSP11172 480 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 GATA1P15976 413 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 BCL3P20749 454 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 PDHA2P29803 388 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 RORAP35398 523 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 ACVRL1P37023 503 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 OPRD1P41143 372 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 NAA10P41227 235 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 ELK3P41970 407 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 CX3CR1P49238 355 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 IST1P53990 364 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 HMGCS2P54868 508 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 CLDN18P56856 261 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 CYCSP99999 105 aaKnown RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 ZNF154Q13106 437 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 VGLL4Q14135 290 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 GRB7Q14451 532 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 GNMTQ14749 295 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 DUSP7Q16829 419 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 IZUMO4Q1ZYL8 232 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 FFAR4Q5NUL3 377 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 LINC00242Q5T6M2 205 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 SLC22A10Q63ZE4 541 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 NADSYN1Q6IA69 706 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 OR52W1Q6IF63 320 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 FRRS1Q6ZNA5 592 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 C9orf139Q6ZV77 190 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 CCDC71Q8IV32 467 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 OR2L13Q8N349 312 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 GATSQ8NAP1 163 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 OR52H1Q8NGJ2 320 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 OR52I1Q8NGK6 324 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 NDNFQ8TB73 568 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 PLPPR1Q8TBJ4 325 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 TOMM40LQ969M1 308 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 TOP1MTQ969P6 601 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 C11orf52Q96A22 123 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 RAB3CQ96E17 227 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 CNRIP1Q96F85 164 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 ZBED6CLQ96FA7 236 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 ZNF479Q96JC4 524 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 ZNF300Q96RE9 604 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 TM6SF2Q9BZW4 377 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 RACGAP1Q9H0H5 632 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 WDR13Q9H1Z4 485 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 REEP4Q9H6H4 257 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 MOB1AQ9H8S9 216 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 UGT1A10Q9HAW8 530 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 SPACA1Q9HBV2 294 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 ZNF334Q9HCZ1 680 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 MYOZ2Q9NPC6 264 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 ZFP57Q9NU63 452 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 GPATCH2LQ9NWQ4 482 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 EHFQ9NZC4 300 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 CD300AQ9UGN4 299 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 FBXO7Q9Y3I1 522 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 GSTTP1A0A1W2PQM5 241 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 TRABD2BA6NFA1 517 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 PP2D1A8MPX8 630 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 PDZK1P1A8MUH7 402 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 M0R3G1 203 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 NDUFAB1O14561 156 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 RAB29O14966 203 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 CHST1O43916 411 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 PRKYO43930 277 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 PCDH7O60245 1069 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 TOM1O60784 492 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 SH3BGRLO75368 114 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 NXPH4O95158 308 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 PPP1R3DO95685 299 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 POP4O95707 220 aaKnown RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 OXSR1O95747 527 aaPredicted RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 SERPINE2P07093 398 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 WNT2P09544 360 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 H2AFZP0C0S5 128 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 CT62P0C5K7 136 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 ABOP16442 354 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 HOXB8P17481 243 aaPredicted RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 ZNF10P21506 573 aaPredicted RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 CD82P27701 267 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 DCKP27707 260 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 IL12AP29459 219 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 MMP12P39900 470 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 OPRL1P41146 370 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 LEPP41159 167 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 SLC1A1P43005 524 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 GPR4P46093 362 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 XCR1P46094 333 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 PRKXP51817 358 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 PSMD4P55036 377 aaKnown RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 FOXG1P55316 489 aaPredicted RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 PKNOX1P55347 436 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 RIPK4P57078 832 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 TPM4P67936 248 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 MRPS22P82650 360 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms