RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 FIG4Q92562 907 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 CNOT9Q92600 299 aaKnown RBP7.48□□□□□ -1.21
PSEN1-223ENST00000557511 RNASE6Q93091 150 aaKnown RBP7.48□□□□□ -1.21
PSEN1-223ENST00000557511 MAL2Q969L2 176 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 ZG16BQ96DA0 208 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 GMPPAQ96IJ6 420 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-223ENST00000557511 ZNF845Q96IR2 970 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-223ENST00000557511 ZNF317Q96PQ6 595 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-223ENST00000557511 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
PSEN1-223ENST00000557511 SPOCK3Q9BQ16 436 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 CPPED1Q9BRF8 314 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-223ENST00000557511 SLC39A3Q9BRY0 314 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 TACO1Q9BSH4 297 aaKnown RBP7.48□□□□□ -1.21
PSEN1-223ENST00000557511 RBM24Q9BX46 236 aaKnown RBP7.48□□□□□ -1.21
PSEN1-223ENST00000557511 CLCF1Q9UBD9 225 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 CHRNA9Q9UGM1 479 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 PROCRQ9UNN8 238 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 GMEB1Q9Y692 573 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 FLNCQ14315 2725 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 DSPPQ9NZW4 1301 aa7.48□□□□□ -1.21
PSEN1-223ENST00000557511 HIVEP3Q5T1R4 2406 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 TRBV5-3A0A0A0MS03 114 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 A0A0J9YW62 118 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 CENPVL1A0A0U1RR11 272 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 A0A1W2PNV4 684 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 CDHR4A6H8M9 788 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 CLDN24A6NM45 220 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 B4DXG7 233 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 H0YC42 278 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 SULT2B1O00204 365 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 FAAHO00519 579 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 MSTNO14793 375 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 CASKO14936 926 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 DCTN3O75935 186 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 PRKD3O94806 890 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 TGM6O95932 706 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 C1QCP02747 245 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 CCNA2P20248 432 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 RPS4Y1P22090 263 aaKnown RBP7.47□□□□□ -1.21
PSEN1-223ENST00000557511 ENPP1P22413 925 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 PSMA4P25789 261 aaKnown RBP7.47□□□□□ -1.21
PSEN1-223ENST00000557511 GTF2E2P29084 291 aaKnown RBP7.47□□□□□ -1.21
PSEN1-223ENST00000557511 AQP1P29972 269 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 SEC24CP53992 1094 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 TPD52P55327 224 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-223ENST00000557511 RAC3P60763 192 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 EPS8Q12929 822 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 SYT14P1Q58G82 188 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 FBXW10Q5XX13 1052 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 HIST2H2BCQ6DN03 193 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 WBP2NLQ6ICG8 309 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 ERICH5Q6P6B1 374 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 MYO7BQ6PIF6 2116 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 ZNF836Q6ZNA1 936 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 LUZP2Q86TE4 346 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 SERPINA11Q86U17 422 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 MTDHQ86UE4 582 aaKnown RBP7.47□□□□□ -1.21
PSEN1-223ENST00000557511 RANBP3LQ86VV4 465 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-223ENST00000557511 MSRB3Q8IXL7 192 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 NAXEQ8NCW5 288 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 FAM71CQ8NEG0 241 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 OR8J3Q8NGG0 315 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 OR10A6Q8NH74 314 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 SLC35B4Q969S0 331 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 LRRC58Q96CX6 371 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 ZNF559Q9BR84 538 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 NAA11Q9BSU3 229 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-223ENST00000557511 TAPBPLQ9BX59 468 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 EFCAB1Q9HAE3 211 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 TMEM27Q9HBJ8 222 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 SLC52A3Q9NQ40 469 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 CTPS2Q9NRF8 586 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 ARMCX1Q9P291 453 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 KLHL9Q9P2J3 617 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 NDRG3Q9UGV2 375 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 HDGFL3Q9Y3E1 203 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 ZNF407Q9C0G0 2248 aa7.47□□□□□ -1.21
PSEN1-223ENST00000557511 GTF3C1Q12789 2109 aa7.46□□□□□ -1.21
PSEN1-223ENST00000557511 TMED7-TICAM2A0A0A6YYA0 188 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 TUBAL3A6NHL2 446 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 KDM4EB2RXH2 506 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-223ENST00000557511 ETV2O00321 342 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-223ENST00000557511 SYT5O00445 386 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 AIM2O14862 343 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 GSTA4O15217 222 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 ZNF208O43345 1280 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 DNPH1O43598 174 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 EIF1BO60739 113 aaKnown RBP7.46□□□□□ -1.22
PSEN1-223ENST00000557511 DNAJA2O60884 412 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 GMNNO75496 209 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 GHRHP01286 108 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 GKN3PP0CG01 181 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 COX4I1P13073 169 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 HOXB9P17482 250 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-223ENST00000557511 TACR3P29371 465 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 SSTR2P30874 369 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 IFNA8P32881 189 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 CPOXP36551 454 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 KIR2DL3P43628 341 aa7.46□□□□□ -1.22
PSEN1-223ENST00000557511 RGS8P57771 180 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms