RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 RASL10AQ92737 203 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 PEX13Q92968 403 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 CCDC42Q96M95 316 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 CATSPER2Q96P56 530 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SPZ1Q9BXG8 430 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 GLT8D2Q9H1C3 349 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 MFSD1Q9H3U5 465 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 CLSTN2Q9H4D0 955 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SLC38A10Q9HBR0 1119 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 DMAP1Q9NPF5 467 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 ABCC13Q9NSE7 274 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 EMC3Q9P0I2 261 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 ARMCX1Q9P291 453 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 LAMP5Q9UJQ1 280 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 PYCARDQ9ULZ3 195 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 RNF24Q9Y225 148 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 CFL2Q9Y281 166 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 U3KQV3 271 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 ASTN1O14525 1302 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 XIRP2A4UGR9 3374 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 TANC1Q9C0D5 1861 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 SYNJ2BP-COX16A0A087WUM0 186 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 A0A087WZY1 265 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 LOC105371267A0A1B0GV96 52 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 A0A1B0GVG6 124 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 TTC26A0AVF1 554 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 MFSD2BA6NFX1 497 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF487B1APH4 448 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 H3BTX0 84 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 E2F3O00716 465 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 CETN3O15182 167 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ALOX15BO15296 676 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ZW10O43264 779 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 GJB5O95377 273 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ADCY5O95622 1261 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 NUDT14O95848 222 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ANXA4P09525 319 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-212ENST00000557477 FOLR2P14207 255 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF3P17036 446 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 IL32P24001 234 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 SHC1P29353 583 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ADRA1AP35348 466 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ACADVLP49748 655 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ARHGDIAP52565 204 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 PLTPP55058 493 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 MRPS15P82914 257 aaKnown RBP3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ZFP36L1Q07352 338 aaKnown RBP3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ITGB3BPQ13352 177 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-212ENST00000557477 EXOSC2Q13868 293 aaKnown RBP3.63□□□□□ -1.83
PRPF39-212ENST00000557477 SPCS2Q15005 226 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ABRAXAS2Q15018 415 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 NDUFA5Q16718 116 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 CCDC183Q5T5S1 534 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 C8orf74Q6P047 294 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 LPCAT2Q7L5N7 544 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 NET1Q7Z628 596 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-212ENST00000557477 GTSCR1Q86UQ5 136 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 BEST4Q8NFU0 473 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 ADIPOR1Q96A54 375 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 TSG101Q99816 390 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 CARD6Q9BX69 1037 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 C8orf33Q9H7E9 229 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-212ENST00000557477 COQ10BQ9H8M1 238 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 PSTPIP2Q9H939 334 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 C12orf10Q9HB07 376 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 DCAF13Q9NV06 445 aaKnown RBP3.63□□□□□ -1.83
PRPF39-212ENST00000557477 NYAP2Q9P242 653 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 GHRLQ9UBU3 117 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 Q9Y3F1 56 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 FADS3Q9Y5Q0 445 aa3.63□□□□□ -1.83
PRPF39-212ENST00000557477 IGHV3OR16-12A0A075B7B8 117 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 OR6C65A6NJZ3 312 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 LRRC30A6NM36 301 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 RSPH10B2B2RC85 870 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 ANKRD65E5RJM6 399 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 KMOO15229 486 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 GPAA1O43292 621 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 OR5F1O95221 314 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 LCA5LO95447 670 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 GUCA1CO95843 209 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 HEXBP07686 556 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 CLTAP09496 248 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 RSPH10BP0C881 870 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 EPB41P11171 864 aaKnown RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 ACADSP16219 412 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 EVI2BP34910 448 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 MDH1P40925 334 aaKnown RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 PTGFRP43088 359 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 PLOD1Q02809 727 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 TFDP1Q14186 410 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 EIF2B1Q14232 305 aaKnown RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 STK38Q15208 465 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 LTB4RQ15722 352 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 CDKN3Q16667 212 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 TPD52L1Q16890 204 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 CNPY1Q3B7I2 92 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 MS4A13Q5J8X5 152 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 C3orf62Q6ZUJ4 267 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 VPS36Q86VN1 386 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 SPATA24Q86W54 205 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms