RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 NANOGQ9H9S0 305 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 GP6Q9HCN6 339 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 ARMCX1Q9P291 453 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 KCNN3Q9UGI6 736 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 OSGIN1Q9UJX0 560 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 SLC13A4Q9UKG4 626 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 HDGFL3Q9Y3E1 203 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 UTP20O75691 2785 aaKnown RBP11.18□□□□□ -0.62
SLIRP-209ENST00000557342 TMED7-TICAM2A0A0A6YYA0 188 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 A8MXE2 369 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 SULT2B1O00204 365 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 SNX3O60493 162 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 SS18L1O75177 396 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-209ENST00000557342 SMNDC1O75940 238 aaKnown RBP eCLIP11.17□□□□□ -0.62
SLIRP-209ENST00000557342 PRKD3O94806 890 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 PMS2P2O95744 297 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 CD8BP10966 210 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 DRD4P21917 467 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 ENPP1P22413 925 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 CXCR1P25024 350 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 TACR3P29371 465 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 SSTR2P30874 369 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 PCGF2P35227 344 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 DIO1P49895 249 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 SIRPAP78324 504 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 SORDQ00796 357 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 GUSBP1Q15486 140 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 VWA1Q6PCB0 445 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 FCRLAQ7L513 359 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 LUZP2Q86TE4 346 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 MTDHQ86UE4 582 aaKnown RBP11.17□□□□□ -0.62
SLIRP-209ENST00000557342 PTOV1Q86YD1 416 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 ARMC8Q8IUR7 673 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 CADM2Q8N3J6 435 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 OR6K3Q8NGY3 331 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 RNF128Q8TEB7 428 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 ROBO4Q8WZ75 1007 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 ZHX1-C8orf76Q96EF9 292 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 C14orf79Q96F83 325 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 SRXN1Q9BYN0 137 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 TRIM8Q9BZR9 551 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 ADAM19Q9H013 955 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 KLHL28Q9NXS3 571 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 PROCRQ9UNN8 238 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 AP3M1Q9Y2T2 418 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 TMED7Q9Y3B3 224 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 CHST2Q9Y4C5 530 aa11.17□□□□□ -0.62
SLIRP-209ENST00000557342 FXYD1O00168 92 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 DNPH1O43598 174 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 COX4I1P13073 169 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 AQP1P29972 269 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 KIR2DL3P43628 341 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 PCYT1AP49585 367 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 PCBP3P57721 371 aaKnown RBP11.16□□□□□ -0.62
SLIRP-209ENST00000557342 VMACQ2NL98 169 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 TMEM201Q5SNT2 666 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 ERICH5Q6P6B1 374 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 BTLAQ7Z6A9 289 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 ARPINQ7Z6K5 226 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 PATL1Q86TB9 770 aaKnown RBP11.16□□□□□ -0.62
SLIRP-209ENST00000557342 ZZZ3Q8IYH5 903 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 RCN3Q96D15 328 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 CMTM5Q96DZ9 223 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 ZNF559Q9BR84 538 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 SLC39A3Q9BRY0 314 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 FANCFQ9NPI8 374 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 PLSCR4Q9NRQ2 329 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 GALNT8Q9NY28 637 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 ELOVL5Q9NYP7 299 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 KLHL9Q9P2J3 617 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 RPS6KB2Q9UBS0 482 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 TRAPPC4Q9Y296 219 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 PKDREJQ9NTG1 2253 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 MAST4O15021 2626 aa11.16□□□□□ -0.62
SLIRP-209ENST00000557342 TMEM72A0PK05 275 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 TUBAL3A6NHL2 446 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 M0QX08 132 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 CYTIPO60759 359 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 MFN2O95140 757 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 CGAP01215 116 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 C8BP07358 591 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 PRG2P13727 222 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 CCNA2P20248 432 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 CPOXP36551 454 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 GZMMP51124 257 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 NCALDP61601 193 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 MYBPHQ13203 477 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 RABL3Q5HYI8 236 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 STK32CQ86UX6 486 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 CALHM3Q86XJ0 350 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 POU5F2Q8N7G0 328 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 SLC26A7Q8TE54 656 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 ABHD3Q8WU67 409 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 RASSF5Q8WWW0 418 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 ARL5BQ96KC2 179 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 POTEKPQ9BYX7 375 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 TRIM2Q9C040 744 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 EFCAB1Q9HAE3 211 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 C12orf10Q9HB07 376 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms