RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 OR6K3Q8NGY3 331 aa20.43■□□□□ 0.86
TDP1-216ENST00000556867 LRRC58Q96CX6 371 aa20.43■□□□□ 0.86
TDP1-216ENST00000556867 ZNF607Q96SK3 696 aa20.43■□□□□ 0.86
TDP1-216ENST00000556867 RSPO3Q9BXY4 272 aaPredicted RBP20.43■□□□□ 0.86
TDP1-216ENST00000556867 ADAM19Q9H013 955 aa20.43■□□□□ 0.86
TDP1-216ENST00000556867 GALNT8Q9NY28 637 aa20.43■□□□□ 0.86
TDP1-216ENST00000556867 ARMCX1Q9P291 453 aa20.43■□□□□ 0.86
TDP1-216ENST00000556867 CLEC4AQ9UMR7 237 aa20.43■□□□□ 0.86
TDP1-216ENST00000556867 TMED7-TICAM2A0A0A6YYA0 188 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 CCDC22O60826 627 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 TFPIP10646 304 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 PRG2P13727 222 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 TACR3P29371 465 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 DIO1P49895 249 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 MAP2K6P52564 334 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 CTBP2P56545 445 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 PCBP3P57721 371 aaKnown RBP20.42■□□□□ 0.86
TDP1-216ENST00000556867 NANOGP8Q6NSW7 305 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 TMPPEQ6ZT21 453 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 FCRLAQ7L513 359 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 SERPINA11Q86U17 422 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 OR8J3Q8NGG0 315 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 ABHD3Q8WU67 409 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 ELAC2Q9BQ52 826 aaKnown RBP20.42■□□□□ 0.86
TDP1-216ENST00000556867 SLC39A3Q9BRY0 314 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 NSRP1Q9H0G5 558 aaKnown RBP20.42■□□□□ 0.86
TDP1-216ENST00000556867 NANOGQ9H9S0 305 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 GP6Q9HCN6 339 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 TMED7Q9Y3B3 224 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 HDGFL3Q9Y3E1 203 aa20.42■□□□□ 0.86
TDP1-216ENST00000556867 TEX15Q9BXT5 2789 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 MPDZO75970 2070 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 LOC100653049A0A140TA62 436 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 ZNF208O43345 1280 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 KRT34O76011 436 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 KIR2DL3P43628 341 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 PCYT1AP49585 367 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 COPZ1P61923 177 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 CSNK2A1P68400 391 aaPredicted RBP20.41■□□□□ 0.86
TDP1-216ENST00000556867 WBP2NLQ6ICG8 309 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 SLC30A8Q8IWU4 369 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 ZZZ3Q8IYH5 903 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 SLC43A2Q8N370 569 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 PCYOX1LQ8NBM8 494 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 SH3GL1Q99961 368 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 OPN3Q9H1Y3 402 aaPredicted RBP20.41■□□□□ 0.86
TDP1-216ENST00000556867 PROCRQ9UNN8 238 aa20.41■□□□□ 0.86
TDP1-216ENST00000556867 TMEM72A0PK05 275 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 PRORSD1PA6NEY8 169 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 SULT2B1O00204 365 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 SERPINB7O75635 380 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 PMS2P2O95744 297 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 DRD4P21917 467 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 ENPP1P22413 925 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 AQP1P29972 269 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 AGTR1P30556 359 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 PCGF2P35227 344 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 GZMMP51124 257 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 MYBPHQ13203 477 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 SNTB1Q13884 538 aaKnown RBP20.4■□□□□ 0.86
TDP1-216ENST00000556867 ZNF474Q6S9Z5 364 aaPredicted RBP20.4■□□□□ 0.86
TDP1-216ENST00000556867 CADM2Q8N3J6 435 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 BHLHE22Q8NFJ8 381 aaPredicted RBP20.4■□□□□ 0.86
TDP1-216ENST00000556867 OR10A6Q8NH74 314 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 RP9Q8TA86 221 aaKnown RBP20.4■□□□□ 0.86
TDP1-216ENST00000556867 ARL5BQ96KC2 179 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 ZNF559Q9BR84 538 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 OR11A1Q9GZK7 315 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 PLSCR4Q9NRQ2 329 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 CRIM1Q9NZV1 1036 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 KLHL13Q9P2N7 655 aa20.4■□□□□ 0.86
TDP1-216ENST00000556867 GMNCA6NCL1 334 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 SMAD9O15198 467 aaKnown RBP20.39■□□□□ 0.85
TDP1-216ENST00000556867 FRS3O43559 492 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 DNPH1O43598 174 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 PRKD3O94806 890 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 MFN2O95140 757 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 FESP07332 822 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 CCNA2P20248 432 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 CPOXP36551 454 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 GYS2P54840 703 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 TLE4Q04727 773 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 RABL3Q5HYI8 236 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 COMTD1Q86VU5 262 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 ARMC8Q8IUR7 673 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 DDIT4LQ96D03 193 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 TACO1Q9BSH4 297 aaKnown RBP20.39■□□□□ 0.85
TDP1-216ENST00000556867 FAM107BQ9H098 131 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 GID8Q9NWU2 228 aa20.39■□□□□ 0.85
TDP1-216ENST00000556867 IGHV3-15A0A0B4J1V0 119 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 SNX3O60493 162 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 TPST1O60507 370 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 CYTIPO60759 359 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 GNGT1P63211 74 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 MTDHQ86UE4 582 aaKnown RBP20.38■□□□□ 0.85
TDP1-216ENST00000556867 CALHM3Q86XJ0 350 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 POU5F2Q8N7G0 328 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 ZNF610Q8N9Z0 462 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 FAM222BQ8WU58 562 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 C3orf49Q96BT1 292 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms