RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ENPP1P22413 925 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 RYKP34925 604 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 APOBEC1P41238 236 aaKnown RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 MAGEA8P43361 318 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 HTR3AP46098 478 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 STX1BP61266 288 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 KCNJ10P78508 379 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 MERTKQ12866 999 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 TESK1Q15569 626 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 CTU2Q2VPK5 515 aaKnown RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 SAXO2Q658L1 398 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 HEPHL1Q6MZM0 1159 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 PAMR1Q6UXH9 720 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 FCRLAQ7L513 359 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 RNF130Q86XS8 419 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 CMIPQ8IY22 773 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF619Q8N2I2 560 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ARFGAP2Q8N6H7 521 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 STEAP2Q8NFT2 490 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 LRRC8CQ8TDW0 803 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 SLC25A43Q8WUT9 341 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ROBO4Q8WZ75 1007 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 RAB8BQ92930 207 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 PIGTQ969N2 578 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ZC3HAV1LQ96H79 300 aaKnown RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ADGRG7Q96K78 797 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 FANCD2OSQ96PS1 177 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 OR5B2Q96R09 309 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ARMC7Q9H6L4 198 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 TMBIM4Q9HC24 238 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ARGLU1Q9NWB6 273 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 CALML5Q9NZT1 146 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 GPR52Q9Y2T5 361 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 TESMINQ9Y4I5 508 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 SETD2Q9BYW2 2564 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-222ENST00000556768 EML6Q6ZMW3 1958 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 F8P00451 2351 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 SULT2B1O00204 365 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 POLR3GO15318 223 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-222ENST00000556768 ARHGEF9O43307 516 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 KIAA0513O60268 411 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 TGDSO95455 350 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 H6PDO95479 791 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 TFPIP10646 304 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 CD99P14209 185 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 FPR1P21462 350 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 CRATP43155 626 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 MAP2K3P46734 347 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 CLK1P49759 484 aaKnown RBP6.54□□□□□ -1.36
SCFD1-222ENST00000556768 MAP2K6P52564 334 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 NR1H2P55055 460 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 SESN3P58005 492 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 COPZ1P61923 177 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 PHC1P78364 1004 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 SKP2Q13309 424 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 TOMM34Q15785 309 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF239Q16600 458 aaKnown RBP6.54□□□□□ -1.36
SCFD1-222ENST00000556768 DEFB113Q30KQ7 82 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 C4orf46Q504U0 113 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 PDCD4Q53EL6 469 aaKnown RBP6.54□□□□□ -1.36
SCFD1-222ENST00000556768 SLC25A53Q5H9E4 307 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 C6orf10Q5SRN2 563 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 ANKRD34AQ69YU3 496 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 PEX5LQ8IYB4 626 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 MIER2Q8N344 545 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 POC1BQ8TC44 478 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF75CPQ92670 426 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-222ENST00000556768 MBD6Q96DN6 1003 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 PIK3IP1Q96FE7 263 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 ITCHQ96J02 903 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 LIME1Q9H400 295 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 PLEKHF2Q9H8W4 249 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 EMC3Q9P0I2 261 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 C6orf203Q9P0P8 240 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-222ENST00000556768 KLHL13Q9P2N7 655 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 CGGBP1Q9UFW8 167 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-222ENST00000556768 PRDM4Q9UKN5 801 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 GPR45Q9Y5Y3 372 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 MED12Q93074 2177 aa6.54□□□□□ -1.36
SCFD1-222ENST00000556768 HMGN4O00479 90 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 GSNP06396 782 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 DBIP07108 87 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ALDOCP09972 364 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 CRYGSP22914 178 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 IL32P24001 234 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 AGTR1P30556 359 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 CRISP3P54108 245 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 CHRNEQ04844 493 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 RASGEF1BQ0VAM2 473 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 AKAP6Q13023 2319 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 P2RY6Q15077 328 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 GUSBP1Q15486 140 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ZSWIM7Q19AV6 140 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 NDUFAF6Q330K2 333 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 SYT14P1Q58G82 188 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 BEX5Q5H9J7 111 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 AGBL2Q5U5Z8 902 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 AP1ARQ63HQ0 302 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 TYW3Q6IPR3 259 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms