RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 STOX2Q9P2F5 926 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 ATXN10Q9UBB4 475 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 VPS29Q9UBQ0 182 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 FZD4Q9ULV1 537 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 DHDHQ9UQ10 334 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 SLC22A14Q9Y267 594 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 B3GNT3Q9Y2A9 372 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 RNF11Q9Y3C5 154 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 POLR3HQ9Y535 204 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 AP4S1Q9Y587 144 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 HEBP2Q9Y5Z4 205 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 ZFC3H1O60293 1989 aaKnown RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 NUMA1Q14980 2115 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 LRRK1Q38SD2 2015 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 KCNE1BA0A087WTH5 132 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 PRSS51A0A1B0GVH4 220 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 TCRBV3S1A0A5B6 114 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 FAM90A10PA6NDY2 464 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 HELTA6NFD8 242 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 IGLON5A6NGN9 336 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 EPOPA6NHQ4 379 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 OR52A4PA6NMU1 304 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 FOXE1O00358 373 aaPredicted RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 ACOT8O14734 319 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 YKT6O15498 198 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 LINC01565O15544 149 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 PRAMEF2O60811 474 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 RAD51DO75771 328 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 SOD1P00441 154 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 PDYNP01213 254 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 MBPP02686 304 aaPredicted RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 GPIP06744 558 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 SLC35G4P0C7Q5 338 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 C1GALT1C1LP0DN25 315 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 SPP1P10451 314 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 HPGDP15428 266 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 AMD1P17707 334 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 PPIBP23284 216 aaKnown RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 NDUFS1P28331 727 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 IMPA1P29218 277 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 S100A3P33764 101 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 DRD3P35462 400 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 NUDT1P36639 197 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 MAGEA8P43361 318 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 STARP49675 285 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 GTF2A1P52655 376 aaPredicted RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 MRPS22P82650 360 aaKnown RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 CDK3Q00526 305 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 HSF2Q03933 536 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 DMPKQ09013 629 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 HTR4Q13639 388 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 PDK3Q15120 406 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 TRIP6Q15654 476 aaKnown RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 DECR1Q16698 335 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 C18orf21Q32NC0 220 aaPredicted RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 ZNF658BQ4V348 819 aaPredicted RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 RFTN2Q52LD8 501 aaPredicted RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 LCN8Q6JVE9 175 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 MED27Q6P2C8 311 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 CORO6Q6QEF8 472 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 SCIMPQ6UWF3 145 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 LCTLQ6UWM7 567 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 ENPP7Q6UWV6 458 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 B3GLCTQ6Y288 498 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 MBOAT1Q6ZNC8 495 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 IGFN1Q86VF2 1251 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 C17orf64Q86WR6 236 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 HORMAD1Q86X24 394 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 LIX1Q8N485 282 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 TBC1D19Q8N5T2 526 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 NATD1Q8N6N6 113 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 BCORP1Q8N888 145 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 EXD3Q8N9H8 876 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 SMRP1Q8NCR6 262 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 ICA1LQ8NDH6 482 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 OR9I1Q8NGQ6 314 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 OR2T11Q8NH01 316 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 OSR1Q8TAX0 266 aaPredicted RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 LIPHQ8WWY8 451 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 IGFBPL1Q8WX77 278 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 PYDC1Q8WXC3 89 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 SMPDL3AQ92484 453 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 TFGQ92734 400 aaPredicted RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 FGF14Q92915 247 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 FAM131CQ96AQ9 280 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 COQ8BQ96D53 544 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 MSI2Q96DH6 328 aaKnown RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 WDR34Q96EX3 536 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 MED8Q96G25 268 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 ABHD8Q96I13 439 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 THOC3Q96J01 351 aaKnown RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 ITCHQ96J02 903 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 C7orf34Q96L11 122 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 FCRL4Q96PJ5 515 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 CGREF1Q99674 301 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 KCTD14Q9BQ13 255 aaPredicted RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 ECSITQ9BQ95 431 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 CENPKQ9BS16 269 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 C1orf50Q9BV19 199 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 PINK1Q9BXM7 581 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms