RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 HTR1EP28566 365 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 PRDX6P30041 224 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 SLC1A3P43003 542 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 RPS3AP61247 264 aaKnown RBP8.65□□□□□ -1.02
SRP54-210ENST00000556380 DMTNQ08495 405 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 MERTKQ12866 999 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 FOXF2Q12947 444 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 SELENBP1Q13228 472 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 GUSBP1Q15486 140 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 CYP51A1Q16850 503 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 VMACQ2NL98 169 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 TMEM176BQ3YBM2 270 aaPredicted RBP8.65□□□□□ -1.02
SRP54-210ENST00000556380 GLIPR1L2Q4G1C9 344 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 FAM91A1Q658Y4 838 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 HIST2H2BCQ6DN03 193 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 CCDC80Q76M96 950 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 ZNF550Q7Z398 422 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 GRINAQ7Z429 371 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 LSRQ86X29 649 aaPredicted RBP8.65□□□□□ -1.02
SRP54-210ENST00000556380 OR10D3Q8NH80 312 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 FNDC9Q8TBE3 224 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 SMPDL3BQ92485 455 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 OSTF1Q92882 214 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 TM9SF2Q99805 663 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 HOPXQ9BPY8 73 aaPredicted RBP8.65□□□□□ -1.02
SRP54-210ENST00000556380 WFDC6Q9BQY6 131 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 PINK1Q9BXM7 581 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 COQ10BQ9H8M1 238 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 EFCAB1Q9HAE3 211 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 ZNF629Q9UEG4 869 aaPredicted RBP8.65□□□□□ -1.02
SRP54-210ENST00000556380 OSGIN1Q9UJX0 560 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 USP22Q9UPT9 525 aa8.65□□□□□ -1.02
SRP54-210ENST00000556380 MED12LQ86YW9 2145 aa8.65□□□□□ -1.03
SRP54-210ENST00000556380 SLC22A20A6NK97 555 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 CCT8L1PA6NM43 557 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 M0QX08 132 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 MSTNO14793 375 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 FRS3O43559 492 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 CXCL13O43927 109 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 TPST2O60704 377 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 SERPINB7O75635 380 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 TNFSF13O75888 250 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 AQP8O94778 261 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 LGI1O95970 557 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 IGFBP2P18065 325 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 CD247P20963 164 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 ME2P23368 584 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 AQP1P29972 269 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 SFTPDP35247 375 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 APOBEC1P41238 236 aaKnown RBP8.64□□□□□ -1.03
SRP54-210ENST00000556380 KIR2DL2P43627 348 aaPredicted RBP8.64□□□□□ -1.03
SRP54-210ENST00000556380 HTR3AP46098 478 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 EIF1AXP47813 144 aaKnown RBP8.64□□□□□ -1.03
SRP54-210ENST00000556380 CARD18P57730 90 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 VEZF1Q14119 521 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 PON3Q15166 354 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 DUSP7Q16829 419 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 SLC25A35Q3KQZ1 300 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 HBMQ6B0K9 141 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 SP5Q6BEB4 398 aaPredicted RBP8.64□□□□□ -1.03
SRP54-210ENST00000556380 CHMP1BQ7LBR1 199 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 KRT73Q86Y46 540 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 SLC30A8Q8IWU4 369 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 RELL2Q8NC24 303 aaPredicted RBP8.64□□□□□ -1.03
SRP54-210ENST00000556380 GPR32P1Q8NGA4 272 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 ZNF563Q8TA94 476 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 CA5BP1Q8WTZ4 195 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 TAMM41Q96BW9 452 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 CMTM5Q96DZ9 223 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 REXO5Q96IC2 774 aaKnown RBP8.64□□□□□ -1.03
SRP54-210ENST00000556380 ZFP3Q96NJ6 502 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 ZNF607Q96SK3 696 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 ECSITQ9BQ95 431 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 SPATA5L1Q9BVQ7 753 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 SRXN1Q9BYN0 137 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 PIF1Q9H611 641 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 RNF122Q9H9V4 155 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 KCNJ16Q9NPI9 418 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 CTPS2Q9NRF8 586 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 PAQR5Q9NXK6 330 aaPredicted RBP8.64□□□□□ -1.03
SRP54-210ENST00000556380 JKAMPQ9P055 326 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 CHRNA9Q9UGM1 479 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 ANGPT4Q9Y264 503 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 AP3M1Q9Y2T2 418 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 ARHGAP21Q5T5U3 1957 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 POLQO75417 2590 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 FBN2P35556 2912 aa8.64□□□□□ -1.03
SRP54-210ENST00000556380 TMED7-TICAM2A0A0A6YYA0 188 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 A0A1W2PNV4 684 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 NKX2-6A6NCS4 301 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 PRORSD1PA6NEY8 169 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 A6NJY4 79 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 GJE1A6NN92 205 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 PRSS44E7EML9 344 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 SYT5O00445 386 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 NME4O00746 187 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 ZNF208O43345 1280 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 CRHP06850 196 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 TMIGD3P0DMS9 266 aaPredicted RBP8.63□□□□□ -1.03
SRP54-210ENST00000556380 FKBP2P26885 142 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms