RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 NPC1O15118 1278 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 POLR1CO15160 346 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 HOXC11O43248 304 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 EMC8O43402 210 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 OR1F1O43749 312 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 GCM2O75603 506 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ERAL1O75616 437 aaKnown RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 C1QL1O75973 258 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 C1QCP02747 245 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 HLA-DPB1P04440 258 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 HMGN1P05114 100 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 CTSLP07711 333 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 HNRNPA1P09651 372 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 GPR89BP0CG08 455 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 HNRNPCL4P0DMR1 293 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 OR12D1P0DN82 309 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 PSKH1P11801 424 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ADRB3P13945 408 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 GLULP15104 373 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 NPPBP16860 134 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF24P17028 368 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 CSNK2A2P19784 350 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF10P21506 573 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ERP29P30040 261 aaKnown RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 CMPK1P30085 196 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 MTNR1BP49286 362 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 DGKEP52429 567 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ATP12AP54707 1039 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 LIM2P55344 173 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 RGS8P57771 180 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TAS2R38P59533 333 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TAS2R43P59537 309 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 GNG2P59768 71 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 RAP2BP61225 183 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TSPAN31Q12999 210 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 MAB21L1Q13394 359 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SF3B4Q15427 424 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SF3A2Q15428 464 aaKnown RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF77Q15935 545 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 DUSP7Q16829 419 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 MPEG1Q2M385 716 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 WSCD2Q2TBF2 565 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 PGGHGQ32M88 737 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 PLK5Q496M5 336 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SYT14P1Q58G82 188 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SLC25A30Q5SVS4 291 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 NDUFAF5Q5TEU4 345 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 HACD4Q5VWC8 232 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 PLPP4Q5VZY2 271 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TIGD3Q6B0B8 471 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF770Q6IQ21 691 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 RPL13AP3Q6NVV1 102 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 C19orf48Q6RUI8 117 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 MTSS1LQ765P7 747 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 NOXA1Q86UR1 476 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ADIPOR2Q86V24 386 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 MARCH9Q86YJ5 346 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 PLCZ1Q86YW0 608 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SAMD14Q8IZD0 417 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 CDK20Q8IZL9 346 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 IQCF1Q8N6M8 205 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ZBTB44Q8NCP5 570 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ATP6V1C2Q8NEY4 427 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 GPR32P1Q8NGA4 272 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 OR5AR1Q8NGP9 310 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 OR6F1Q8NGZ6 308 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 OR52N1Q8NH53 320 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 OR5K2Q8NHB8 316 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 NEIL3Q8TAT5 605 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 FANK1Q8TC84 345 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 XAGE5Q8WWM1 108 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SORCS1Q8WY21 1168 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SLC7A6Q92536 515 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SMG7Q92540 1137 aaKnown RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 AKAP1Q92667 903 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TFGQ92734 400 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 NACC2Q96BF6 587 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 RNF31Q96EP0 1072 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 C12orf66Q96MD2 445 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF582Q96NG8 517 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 IL17FQ96PD4 163 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TREX2Q9BQ50 279 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 C17orf62Q9BQA9 187 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM246Q9BRR3 403 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SORBS1Q9BX66 1292 aaKnown RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 NIPAL2Q9H841 368 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 FOLH1BQ9HBA9 442 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ABCB9Q9NP78 766 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 FGF20Q9NP95 211 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TIGARQ9NQ88 270 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SLC35C2Q9NQQ7 365 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 PHPT1Q9NRX4 125 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 MED17Q9NVC6 651 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 LYARQ9NX58 379 aaKnown RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 PAQR5Q9NXK6 330 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 COMMD3Q9UBI1 195 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 WNT16Q9UBV4 365 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 KLHL21Q9UJP4 597 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ACAD8Q9UKU7 415 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TBC1D24Q9ULP9 559 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms