RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ING1Q9UK53 422 aaPredicted RBP11.2□□□□□ -0.62
SNX6-207ENST00000556303 NSD1Q96L73 2696 aaPredicted RBP11.2□□□□□ -0.62
SNX6-207ENST00000556303 USF3Q68DE3 2245 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 TMEM247A6NEH6 219 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 GPR171O14626 319 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 ANP32DO95626 131 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 CHRM4P08173 479 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 IL32P24001 234 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 IDH2P48735 452 aaKnown RBP11.19□□□□□ -0.62
SNX6-207ENST00000556303 POLR2HP52434 150 aaKnown RBP11.19□□□□□ -0.62
SNX6-207ENST00000556303 POLR2JP52435 117 aaKnown RBP11.19□□□□□ -0.62
SNX6-207ENST00000556303 CRISP3P54108 245 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 PRAMEF8Q5VWM4 474 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 PRAMEF7Q5VXH5 474 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 ABLIM2Q6H8Q1 611 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 ADAM5Q6NVV9 412 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 EPGNQ6UW88 154 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 ZNF704Q6ZNC4 412 aaPredicted RBP11.19□□□□□ -0.62
SNX6-207ENST00000556303 P2RY8Q86VZ1 359 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 ADGRG3Q86Y34 549 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 P3H2Q8IVL5 708 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 ANKFN1Q8N957 763 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 PIGXQ8TBF5 258 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 WDR60Q8WVS4 1066 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 S100PBPQ96BU1 408 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 DDIT4LQ96D03 193 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 CCL19Q99731 98 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 QRSL1Q9H0R6 528 aaKnown RBP11.19□□□□□ -0.62
SNX6-207ENST00000556303 RAD21L1Q9H4I0 556 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 ARMC7Q9H6L4 198 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 UBTD1Q9HAC8 227 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 TPT1P8Q9HAU6 139 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 CTPS2Q9NRF8 586 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 TMEM181Q9P2C4 612 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 TLN2Q9Y4G6 2542 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 ZANQ9Y493 2812 aa11.19□□□□□ -0.62
SNX6-207ENST00000556303 DSPPQ9NZW4 1301 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 IGHV3-15A0A0B4J1V0 119 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 FAM234BA2RU67 622 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 CFAP73A6NFT4 308 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 FAM171A2A8MVW0 826 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 ZNF814B7Z6K7 855 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 ADAP00813 363 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 GSNP06396 782 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 TFPIP10646 304 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 RYKP34925 604 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 MVDP53602 400 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 SLC16A1P53985 500 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 H3F3AP84243 136 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 EPS8Q12929 822 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 FADDQ13158 208 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 KRTAP21-3Q3LHN1 58 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 LIN52Q52LA3 116 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 COX20Q5RI15 118 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 C1QTNF12Q5T7M4 302 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 OLIG3Q7RTU3 272 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 MAVSQ7Z434 540 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 BIVMQ86UB2 503 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 ZNF611Q8N823 705 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 CNOT9Q92600 299 aaKnown RBP11.18□□□□□ -0.62
SNX6-207ENST00000556303 SLC35B4Q969S0 331 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 PLPPR2Q96GM1 343 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 POTEKPQ9BYX7 375 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 GSX2Q9BZM3 304 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 ADAM19Q9H013 955 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 PIF1Q9H611 641 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 ESRP2Q9H6T0 727 aaKnown RBP11.18□□□□□ -0.62
SNX6-207ENST00000556303 CACYBPQ9HB71 228 aaKnown RBP11.18□□□□□ -0.62
SNX6-207ENST00000556303 ZNF232Q9UNY5 417 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 IFT52Q9Y366 437 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 USH1CQ9Y6N9 552 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 CSPG4Q6UVK1 2322 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 PLCE1Q9P212 2302 aa11.18□□□□□ -0.62
SNX6-207ENST00000556303 RAI1Q7Z5J4 1906 aaPredicted RBP11.17□□□□□ -0.62
SNX6-207ENST00000556303 TMED7-TICAM2A0A0A6YYA0 188 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 A0A0G2JPF8 293 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 CDHR4A6H8M9 788 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 CLDN24A6NM45 220 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 HNRNPCL2B2RXH8 293 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 HNRNPCL3B7ZW38 293 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 C9JVG2 144 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 HS3ST1O14792 307 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 HNRNPCL1O60812 293 aaKnown RBP11.17□□□□□ -0.62
SNX6-207ENST00000556303 DIAPH2O60879 1101 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 BCAS1O75363 584 aaPredicted RBP11.17□□□□□ -0.62
SNX6-207ENST00000556303 PGM3O95394 542 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 FESP07332 822 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 THBS1P07996 1170 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 TFPTP0C1Z6 253 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 HNRNPCL4P0DMR1 293 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 COX5AP20674 150 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 CRATP43155 626 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 DSTNP60981 165 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 STX1BP61266 288 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 SLC35A1P78382 337 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 PLAURQ03405 335 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 LARS2Q15031 903 aaKnown RBP11.17□□□□□ -0.62
SNX6-207ENST00000556303 TIMM23BQ5SRD1 257 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 MRPL2Q5T653 305 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms