RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 OR5M1Q8NGP8 315 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 OR10Q1Q8NGQ4 319 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 POC1BQ8TC44 478 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 STK35Q8TDR2 534 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ADAMTS16Q8TE57 1224 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 C3orf49Q96BT1 292 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ZHX1-C8orf76Q96EF9 292 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 SLC41A3Q96GZ6 507 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 RSRC1Q96IZ7 334 aaKnown RBP6.89□□□□□ -1.31
TDP1-214ENST00000556063 KLHL15Q96M94 604 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 HS6ST2Q96MM7 605 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ZNF347Q96SE7 839 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 SEPHS2Q99611 448 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 FNDC11Q9BVV2 318 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 RSPO3Q9BXY4 272 aaPredicted RBP6.89□□□□□ -1.31
TDP1-214ENST00000556063 POTEKPQ9BYX7 375 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 TP63Q9H3D4 680 aaPredicted RBP6.89□□□□□ -1.31
TDP1-214ENST00000556063 IL1RAPQ9NPH3 570 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 SPRR3Q9UBC9 169 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 RIMS3Q9UJD0 308 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 AURKCQ9UQB9 309 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 HDGFL3Q9Y3E1 203 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ZNF462Q96JM2 2506 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ZZEF1O43149 2961 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ITPR1Q14643 2758 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 SPTBN1Q01082 2364 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 A0A087WUJ7 227 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 TRGV8A0A0C4DH27 118 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 A0A1B0GUH1 482 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 DHRS12A0PJE2 317 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 HTR3EA5X5Y0 456 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 TMEM229AB2RXF0 380 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 SHISA8B8ZZ34 492 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 SULT2B1O00204 365 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 EIF1AYO14602 144 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 ADAMDEC1O15204 470 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 DNPH1O43598 174 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 OR2T1O43869 369 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 AHSA1O95433 338 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 SYNGR4O95473 234 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 FABP3P05413 133 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 H1F0P07305 194 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 RAP2AP10114 183 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 HOXB1P14653 301 aaPredicted RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 GTF2E2P29084 291 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 RBM34P42696 430 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 EIF1AXP47813 144 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 LHX2P50458 406 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 CDH12P55289 794 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 CLDN18P56856 261 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 PIN1Q13526 163 aaPredicted RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 MFSD13AQ14CX5 517 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 TRAM2Q15035 370 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 NPTX1Q15818 432 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 HBMQ6B0K9 141 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 TMEM211Q6ICI0 200 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 ZNF585AQ6P3V2 769 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 MTFR2Q6P444 385 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 TTC33Q6PID6 262 aaPredicted RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 Q6ZPB1 254 aaPredicted RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 RRM2BQ7LG56 351 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 PIWIL3Q7Z3Z3 882 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 ATG4DQ86TL0 474 aaPredicted RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 CD163Q86VB7 1156 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 RBM45Q8IUH3 476 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 LACC1Q8IV20 430 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 ZDHHC21Q8IVQ6 265 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 OFCC1Q8IZS5 231 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 PIK3C3Q8NEB9 887 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 OR4D11Q8NGI4 311 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 OR5M9Q8NGP3 310 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 OR2V1Q8NHB1 315 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 ZPLD1Q8TCW7 415 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 PHF10Q8WUB8 498 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 SLC38A4Q969I6 547 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 WDYHV1Q96HA8 205 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 OR5B2Q96R09 309 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 ZNF300Q96RE9 604 aaPredicted RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 PIP5K1AQ99755 562 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 KLHDC3Q9BQ90 382 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 TMEM43Q9BTV4 400 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 PRR14Q9BWN1 585 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 TAPBPLQ9BX59 468 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 PRRG4Q9BZD6 226 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 SLC19A3Q9BZV2 496 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 AMBRA1Q9C0C7 1298 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 KLHL4Q9C0H6 718 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 PRDM14Q9GZV8 571 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 ANKRD19PQ9H560 264 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 TMEM185BQ9H7F4 350 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 KRCC1Q9NPI7 259 aaPredicted RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 NDUFAF4Q9P032 175 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 MCTS1Q9ULC4 181 aaKnown RBP6.88□□□□□ -1.31
TDP1-214ENST00000556063 OSGIN2Q9Y236 505 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 TRAPPC4Q9Y296 219 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 ZNF835Q9Y2P0 537 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 LOC400499M0QZD8 3231 aa6.88□□□□□ -1.31
TDP1-214ENST00000556063 A0A0J9YW62 118 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 TCRBV5S2A0A599 114 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 TCRBV3S1A0A5B6 114 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms