RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ADAMTS16Q8TE57 1224 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 DOK4Q8TEW6 326 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 PIK3R3Q92569 461 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF501Q96CX3 271 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 ART5Q96L15 291 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 MCHR1Q99705 422 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 NUDT22Q9BRQ3 303 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 DGCR6LQ9BY27 220 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 QRSL1Q9H0R6 528 aaKnown RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 OR10A5Q9H207 317 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 MS4A5Q9H3V2 200 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 LRRN3Q9H3W5 708 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CXorf56Q9H5V9 222 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 SYNDIG1Q9H7V2 258 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 FOLH1BQ9HBA9 442 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 Q9N2J8 555 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CCNB1IP1Q9NPC3 277 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 KRCC1Q9NPI7 259 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 MKKSQ9NPJ1 570 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 RLIMQ9NVW2 624 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 TMEM9Q9P0T7 183 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 A4GNTQ9UNA3 340 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CFL2Q9Y281 166 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 B3GALT1Q9Y5Z6 326 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 MAU2Q9Y6X3 613 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 WNK1Q9H4A3 2382 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 RYR1P21817 5038 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 LY6G6EA0A0G2JKS1 128 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 C17orf105B2RV13 164 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 E9PQ18 207 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 H3BMH7 237 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 SLC1A7O00341 560 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 KIAA0513O60268 411 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 FMO6PO60774 539 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 FAM20BO75063 409 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 CYP7B1O75881 506 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 KCNK2O95069 426 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 OR5F1O95221 314 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 EPPINO95925 133 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 HBQ1P09105 142 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 CKMT1AP12532 417 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 POU2F1P14859 743 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 MAOAP21397 527 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 S1PR1P21453 382 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 AGXTP21549 392 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 RPS4Y1P22090 263 aaKnown RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 SSTR4P31391 388 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 TRHRP34981 398 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 RORAP35398 523 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 OR1D4P47884 311 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 EMDP50402 254 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 PGDP52209 483 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 SH3BGRP55822 239 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 CDC42P60953 191 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 EEF1A1P68104 462 aaKnown RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 E2F1Q01094 437 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ALDH6A1Q02252 535 aaKnown RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 TEKQ02763 1124 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 FUT7Q11130 342 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 MAD2L1BPQ15013 274 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 NPTX1Q15818 432 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 DECR1Q16698 335 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 CTU2Q2VPK5 515 aaKnown RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ZBED5Q49AG3 693 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 FLYWCH1Q4VC44 716 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ENTPD8Q5MY95 495 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 CCNJQ5T5M9 372 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 AP1ARQ63HQ0 302 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF770Q6IQ21 691 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 KLHL17Q6TDP4 642 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF836Q6ZNA1 936 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 RBM44Q6ZP01 1051 aaKnown RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 DGAT2L6Q6ZPD8 337 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 QSOX2Q6ZRP7 698 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 KCTD8Q6ZWB6 473 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ARHGAP22Q7Z5H3 698 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 GPR141Q7Z602 305 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 HMGN2P46Q86SG4 172 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 BIVMQ86UB2 503 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 P3H2Q8IVL5 708 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 TMEM151BQ8IW70 566 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 CLIP4Q8N3C7 705 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 OR4K5Q8NGD3 323 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 PIGXQ8TBF5 258 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 CPT1CQ8TCG5 803 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 SLC7A13Q8TCU3 470 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 GNPDA2Q8TDQ7 276 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 IPCEF1Q8WWN9 437 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF566Q969W8 418 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ZG16BQ96DA0 208 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 VSTM2LQ96N03 204 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 GFM1Q96RP9 751 aaKnown RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 NODALQ96S42 347 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 MYCBPQ99417 103 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 NIPSNAP1Q9BPW8 284 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 TUBA1CQ9BQE3 449 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 CNPPD1Q9BV87 410 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 RSPO3Q9BXY4 272 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 HOXD1Q9GZZ0 328 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 NECTIN3Q9NQS3 549 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms