RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 RGS4P49798 205 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 CCNG1P51959 295 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 PEX3P56589 373 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 OSTNP61366 133 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 RPL23AP62750 156 aaKnown RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 RPS27AP62979 156 aaKnown RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 CNTN2Q02246 1040 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 RAD51Q06609 339 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ZNF33AQ06730 810 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 CYP24A1Q07973 514 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 FCHO2Q0JRZ9 810 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 KIAA0141Q14154 515 aaPredicted RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 SELPLGQ14242 412 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 FASTKQ14296 549 aaKnown RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 EMC2Q15006 297 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 FAM189A2Q15884 450 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 SSX2Q16385 188 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 UPP1Q16831 310 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ECSCRQ19T08 205 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 KNOP1Q1ED39 458 aaKnown RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 GOLGA7BQ2TAP0 167 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 LINC01620Q4KN68 170 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 SPANXN2Q5MJ10 180 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 RABGAP1LQ5R372 815 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 PDZK1Q5T2W1 519 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ADAMTSL4-AS1Q5T5F5 129 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 BEND3Q5T5X7 828 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 C1orf146Q5VVC0 180 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 C1orf94Q6P1W5 598 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ATRAIDQ6UW56 229 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 LCLAT1Q6UWP7 414 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 TMIGD1Q6UXZ0 262 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 Q6ZRP5 223 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 SERINC5Q86VE9 423 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 FAM228AQ86W67 206 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 SLC38A6Q8IZM9 456 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 FBXL16Q8N461 479 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 KIF2BQ8N4N8 673 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 NDNFQ8TB73 568 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 LRRC20Q8TCA0 184 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 PNPT1Q8TCS8 783 aaKnown RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 SPPL2AQ8TCT8 520 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 RAET1EQ8TD07 263 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 PCNPQ8WW12 178 aaKnown RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 HTR3CQ8WXA8 447 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 GTF3AQ92664 365 aaKnown RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 DLX4Q92988 240 aaPredicted RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 C11orf52Q96A22 123 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 CCDC127Q96BQ5 260 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ECHDC3Q96DC8 303 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 CNRIP1Q96F85 164 aaPredicted RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 PLEKHA8Q96JA3 519 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 AKR1E2Q96JD6 320 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ZNF514Q96K75 400 aaPredicted RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 LRR1Q96L50 414 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ZNF578Q96N58 590 aaPredicted RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 F2RL3Q96RI0 385 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 NODALQ96S42 347 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 CHP1Q99653 195 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 APOOQ9BUR5 198 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ANGPTL4Q9BY76 406 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 POTEKPQ9BYX7 375 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 YIPF3Q9GZM5 350 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 TOLLIPQ9H0E2 274 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 DNTTIP1Q9H147 329 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 WDR13Q9H1Z4 485 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 RGCCQ9H4X1 137 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 SLC40A1Q9NP59 571 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 NRN1Q9NPD7 142 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ADAP2Q9NPF8 381 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 CHRAC1Q9NRG0 131 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 TREX1Q9NSU2 369 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 FAIMQ9NVQ4 179 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 C1orf123Q9NWV4 160 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 CMTM6Q9NX76 183 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 KLRF1Q9NZS2 232 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 EIF3KQ9UBQ5 218 aaKnown RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 DCDC2Q9UHG0 476 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 CLEC2DQ9UHP7 191 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ENOPH1Q9UHY7 261 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 ADAM28Q9UKQ2 775 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 MRPS33Q9Y291 106 aaKnown RBP2.54□□□□□ -2
MTHFD1-212ENST00000555858 OR10H1Q9Y4A9 318 aa2.54□□□□□ -2
MTHFD1-212ENST00000555858 KIAA0232Q92628 1395 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 PLEKHH1Q9ULM0 1364 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 MN1Q10571 1320 aaPredicted RBP2.53□□□□□ -2
MTHFD1-212ENST00000555858 LOC105371242A0A075B767 164 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 PPIAL4CA0A0B4J2A2 164 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 A0A0J9YVX5 310 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 A0A1W2PQ67 120 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 LRIT2A6NDA9 550 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 HELTA6NFD8 242 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 TUBAL3A6NHL2 446 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 ASB14A6NK59 587 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 ZNF98A6NK75 572 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 SMIM23A6NLE4 172 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 A8MXQ7 604 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 TCP11X1B4DZS4 312 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 G3V2L1 256 aa2.53□□□□□ -2
MTHFD1-212ENST00000555858 TRAFD1O14545 582 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms