RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ABTB1Q969K4 478 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-221ENST00000555773 DDIT4LQ96D03 193 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 TMEM43Q9BTV4 400 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 BDH2Q9BUT1 245 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 POTEKPQ9BYX7 375 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 SLC19A3Q9BZV2 496 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 RHCGQ9UBD6 479 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 OR14I1A6ND48 311 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 SHISA8B8ZZ34 492 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 H3BNX3 289 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 TNFRSF11BO00300 401 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 TIPRLO75663 272 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 LDLRP01130 860 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 IGF2P01344 180 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 MT-ND1P03886 318 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 BMP7P18075 431 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 TCEA1P23193 301 aaKnown RBP11.25□□□□□ -0.61
SHMT2-221ENST00000555773 RRM2P31350 389 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 SPIBQ01892 262 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 ATP6AP1Q15904 470 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 TTC33Q6PID6 262 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-221ENST00000555773 RRM2BQ7LG56 351 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 NKAIN4Q8IVV8 208 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 LILRA2Q8N149 483 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 LINC00471Q8N535 108 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 OR5M1Q8NGP8 315 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 ACOT11Q8WXI4 607 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-221ENST00000555773 SARAFQ96BY9 339 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 EPYCQ99645 322 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 NPAS1Q99742 590 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 SLX1AQ9BQ83 275 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 PRSS27Q9BQR3 290 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 ZNF426Q9BUY5 554 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 SLC6A15Q9H2J7 730 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 REEP1Q9H902 201 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 MAN2C1Q9NTJ4 1040 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 ASF1BQ9NVP2 202 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 TMCC3Q9ULS5 477 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 SLC6A5Q9Y345 797 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 TESMINQ9Y4I5 508 aa11.25□□□□□ -0.61
SHMT2-221ENST00000555773 TMEM72A0PK05 275 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 OR2T1O43869 369 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 NPIPB7O75200 414 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 WISP1O95388 367 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 CPN1P15169 458 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 CCNA2P20248 432 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 POU3F2P20265 443 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-221ENST00000555773 DNAJA1P31689 397 aaKnown RBP11.24□□□□□ -0.61
SHMT2-221ENST00000555773 LIMS1P48059 325 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 ARHGDIAP52565 204 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 TMEM176BQ3YBM2 270 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-221ENST00000555773 SYT14P1Q58G82 188 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 DCST1Q5T197 706 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 PDSS1Q5T2R2 415 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 POMZP3Q6PJE2 187 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 ESPNLQ6ZVH7 1005 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 OR6S1Q8NH40 331 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 OR52J3Q8NH60 311 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 SLC7A13Q8TCU3 470 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 TMEM239Q8WW34 195 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 NRBF2Q96F24 287 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 CENPNQ96H22 339 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-221ENST00000555773 ALPK1Q96QP1 1244 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 TIMP4Q99727 224 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 KLHL4Q9C0H6 718 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 TSPAN10Q9H1Z9 355 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-221ENST00000555773 DCLRE1BQ9H816 532 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 TRAPPC4Q9Y296 219 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 MED31Q9Y3C7 131 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 HDGFL3Q9Y3E1 203 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 SAMHD1Q9Y3Z3 626 aaKnown RBP11.24□□□□□ -0.61
SHMT2-221ENST00000555773 LYVE1Q9Y5Y7 322 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 BOD1L1Q8NFC6 3051 aa11.24□□□□□ -0.61
SHMT2-221ENST00000555773 EML6Q6ZMW3 1958 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 HEATR5AQ86XA9 2040 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 IGKV1D-42A0A075B6H8 117 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 TRAV36DV7A0A075B6V5 113 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 A0A087WUU8 490 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 A0A1B0GTH9 108 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 H3BML4 177 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 BCKDKO14874 412 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 WISP2O76076 250 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 TFPIP10646 304 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 EDN3P14138 238 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 ZNF708P17019 499 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 IL11P20809 199 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 IFNGR2P38484 337 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 STARP49675 285 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 LHX2P50458 406 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 TDGF1P3P51864 188 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 CRYZQ08257 329 aaKnown RBP11.23□□□□□ -0.61
SHMT2-221ENST00000555773 FGD3Q5JSP0 725 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 C1orf140Q5VVS0 124 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 PODNL1Q6PEZ8 512 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 ZNF730Q6ZMV8 503 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 WDR88Q6ZMY6 472 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 MBOAT2Q6ZWT7 520 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 PM20D2Q8IYS1 436 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 CDK20Q8IZL9 346 aa11.23□□□□□ -0.61
SHMT2-221ENST00000555773 MEIOBQ8N635 442 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms