RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 TMPPEQ6ZT21 453 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 Q6ZT83 130 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 HMGN2P46Q86SG4 172 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 ATG4DQ86TL0 474 aaPredicted RBP9.56□□□□□ -0.88
TDP1-212ENST00000555565 KIRREL3Q8IZU9 778 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 ZNF619Q8N2I2 560 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 VPS37AQ8NEZ2 397 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 OIT3Q8WWZ8 545 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 TMEM234Q8WY98 164 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 KISS1RQ969F8 398 aaPredicted RBP9.56□□□□□ -0.88
TDP1-212ENST00000555565 ARL8AQ96BM9 186 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 ZNF775Q96BV0 537 aaPredicted RBP9.56□□□□□ -0.88
TDP1-212ENST00000555565 ROPN1LQ96C74 230 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 TRMT61AQ96FX7 289 aaKnown RBP9.56□□□□□ -0.88
TDP1-212ENST00000555565 ZNF300Q96RE9 604 aaPredicted RBP9.56□□□□□ -0.88
TDP1-212ENST00000555565 SLC35A5Q9BS91 424 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 CCDC106Q9BWC9 280 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 CENPHQ9H3R5 247 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 MEAF6Q9HAF1 191 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 KCNK9Q9NPC2 374 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 SERINC1Q9NRX5 453 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 MARCOQ9UEW3 520 aaPredicted RBP9.56□□□□□ -0.88
TDP1-212ENST00000555565 PRSS50Q9UI38 385 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 GDF2Q9UK05 429 aaPredicted RBP9.56□□□□□ -0.88
TDP1-212ENST00000555565 RAB21Q9UL25 225 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 LIPT1Q9Y234 373 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 SLC35A3Q9Y2D2 325 aa9.56□□□□□ -0.88
TDP1-212ENST00000555565 MAGED1Q9Y5V3 778 aaPredicted RBP9.56□□□□□ -0.88
TDP1-212ENST00000555565 IGHV4-30-2A0A087WSY4 118 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 CLDN24A6NM45 220 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 ZNF724A8MTY0 619 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 SULT2B1O00204 365 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 HMGN4O00479 90 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 SDHDO14521 159 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 LYZL6O75951 148 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 CD8AP01732 235 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 FESP07332 822 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 IL12AP29459 219 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 S100A3P33764 101 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 APOBEC1P41238 236 aaKnown RBP9.55□□□□□ -0.88
TDP1-212ENST00000555565 KHKP50053 298 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 CLNS1AP54105 237 aaKnown RBP9.55□□□□□ -0.88
TDP1-212ENST00000555565 NME5P56597 212 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 UFM1P61960 85 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 CHRNEQ04844 493 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 TMEM249Q2WGJ8 235 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 PGGHGQ32M88 737 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 NCMAPQ5T1S8 102 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 ABLIM2Q6H8Q1 611 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 DNAJC14Q6Y2X3 702 aaPredicted RBP9.55□□□□□ -0.88
TDP1-212ENST00000555565 ARIH2OSQ8N7S6 290 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 OR10H5Q8NGA6 315 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 PIWIL2Q8TC59 973 aaKnown RBP9.55□□□□□ -0.88
TDP1-212ENST00000555565 SLC25A43Q8WUT9 341 aaPredicted RBP9.55□□□□□ -0.88
TDP1-212ENST00000555565 HSD17B8Q92506 261 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 NEUROG1Q92886 237 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 ARL5BQ96KC2 179 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 CCDC115Q96NT0 180 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 BEX2Q9BXY8 128 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 CTPS2Q9NRF8 586 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 AIG1Q9NVV5 245 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 BTNL2Q9UIR0 455 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 RNF115Q9Y4L5 304 aa9.55□□□□□ -0.88
TDP1-212ENST00000555565 YLPM1P49750 1951 aaKnown RBP9.55□□□□□ -0.88
TDP1-212ENST00000555565 HEATR1Q9H583 2144 aaKnown RBP9.55□□□□□ -0.88
TDP1-212ENST00000555565 IGKV3D-15A0A087WSY6 115 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 CLOCKO15516 846 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 TFPIP10646 304 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 EPHA3P29320 983 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 RYKP34925 604 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 CHI3L1P36222 383 aaPredicted RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 WDR4P57081 412 aaKnown RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 CSNK2A1P68400 391 aaPredicted RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 KCNJ10P78508 379 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 SYPL1Q16563 259 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 GPAT3Q53EU6 434 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 BHLHA15Q7RTS1 189 aaPredicted RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 MTDHQ86UE4 582 aaKnown RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 LSRQ86X29 649 aaPredicted RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 RNF130Q86XS8 419 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 ANKFN1Q8N957 763 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 ANKRD42Q8N9B4 389 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 ZNF563Q8TA94 476 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 SMAP2Q8WU79 429 aaPredicted RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 CNOT9Q92600 299 aaKnown RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 DNAJA3Q96EY1 480 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 TNFRSF13CQ96RJ3 184 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 PAIP2Q9BPZ3 127 aaKnown RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 USB1Q9BQ65 265 aaKnown RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 INPP5KQ9BT40 448 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 POTEKPQ9BYX7 375 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 PLA2G12AQ9BZM1 189 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 AMBRA1Q9C0C7 1298 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 SLC38A1Q9H2H9 487 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 ESRP2Q9H6T0 727 aaKnown RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 WDR55Q9H6Y2 383 aaPredicted RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 NGBQ9NPG2 151 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 EXOSC3Q9NQT5 275 aaKnown RBP9.54□□□□□ -0.88
TDP1-212ENST00000555565 CHRNA9Q9UGM1 479 aa9.54□□□□□ -0.88
TDP1-212ENST00000555565 GPR45Q9Y5Y3 372 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms