RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 MPP4Q96JB8 637 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 C7orf34Q96L11 122 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 KLHL15Q96M94 604 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 ZNF300Q96RE9 604 aaPredicted RBP12.87□□□□□ -0.35
CHD8-208ENST00000555301 SEPHS2Q99611 448 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 TMEM185BQ9H7F4 350 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 PAQR5Q9NXK6 330 aaPredicted RBP12.87□□□□□ -0.35
CHD8-208ENST00000555301 NDUFAF4Q9P032 175 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 CAMK2AQ9UQM7 478 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 NINQ8N4C6 2090 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 A0A087WUJ7 227 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 DHRS12A0PJE2 317 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 TMEM72A0PK05 275 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 A8MVM7 634 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 AHRRA9YTQ3 701 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 H0Y3Z8 333 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 EIF1AYO14602 144 aaKnown RBP12.86□□□□□ -0.35
CHD8-208ENST00000555301 ADAMDEC1O15204 470 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 ZNHIT1O43257 154 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 SEMA7AO75326 666 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 HOXD4P09016 255 aaPredicted RBP12.86□□□□□ -0.35
CHD8-208ENST00000555301 RAP2AP10114 183 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 RHCEP18577 417 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 CCNA2P20248 432 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 SFTPDP35247 375 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 CLDN20P56880 219 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 VLDLRP98155 873 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 SRYQ05066 204 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 IGFBP7Q16270 282 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 TMEM176BQ3YBM2 270 aaPredicted RBP12.86□□□□□ -0.35
CHD8-208ENST00000555301 C5orf46Q6UWT4 87 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 PIWIL3Q7Z3Z3 882 aaKnown RBP12.86□□□□□ -0.35
CHD8-208ENST00000555301 GDF7Q7Z4P5 450 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 GGNQ86UU5 652 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 CD163Q86VB7 1156 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 OFCC1Q8IZS5 231 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 OR5M9Q8NGP3 310 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 OR2V1Q8NHB1 315 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 ZPLD1Q8TCW7 415 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 STK35Q8TDR2 534 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 FNDC11Q9BVV2 318 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 POTEKPQ9BYX7 375 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 TP63Q9H3D4 680 aaPredicted RBP12.86□□□□□ -0.35
CHD8-208ENST00000555301 PNPLA3Q9NST1 481 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 RIMS3Q9UJD0 308 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 SLC7A7Q9UM01 511 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 A4GNTQ9UNA3 340 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
CHD8-208ENST00000555301 TCRBV3S1A0A5B6 114 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 hCG_2039718K7EN88 272 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 OPN1LWP04000 364 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 TFPIP10646 304 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 NQO1P15559 274 aaKnown RBP12.85□□□□□ -0.35
CHD8-208ENST00000555301 MAGEA2P43356 314 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 YAP1P46937 504 aaKnown RBP12.85□□□□□ -0.35
CHD8-208ENST00000555301 SUCLG1P53597 346 aaKnown RBP12.85□□□□□ -0.35
CHD8-208ENST00000555301 MRPL49Q13405 166 aaKnown RBP12.85□□□□□ -0.35
CHD8-208ENST00000555301 C3AR1Q16581 482 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 CTU2Q2VPK5 515 aaKnown RBP12.85□□□□□ -0.35
CHD8-208ENST00000555301 ZNF585AQ6P3V2 769 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 LINC00114Q6XXX2 140 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 TSEN54Q7Z6J9 526 aaKnown RBP12.85□□□□□ -0.35
CHD8-208ENST00000555301 TSPYL5Q86VY4 417 aaPredicted RBP12.85□□□□□ -0.35
CHD8-208ENST00000555301 DOLPP1Q86YN1 238 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 ZDHHC21Q8IVQ6 265 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 ADGRG5Q8IZF4 528 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 RSRC1Q96IZ7 334 aaKnown RBP12.85□□□□□ -0.35
CHD8-208ENST00000555301 ADGRG7Q96K78 797 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 PIP5K1AQ99755 562 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 TMEM43Q9BTV4 400 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 ANKRD19PQ9H560 264 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 YY1AP1Q9H869 796 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 TIGARQ9NQ88 270 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 ALKBH4Q9NXW9 302 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 AURKCQ9UQB9 309 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 OSGIN2Q9Y236 505 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 FAM208BQ5VWN6 2430 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 KALRNO60229 2985 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 EML6Q6ZMW3 1958 aa12.85□□□□□ -0.35
CHD8-208ENST00000555301 TRGV8A0A0C4DH27 118 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 A0A0J9YW62 118 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 J3KTA2 159 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 TNFSF11O14788 317 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 PRSS23O95084 383 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 LYPD3O95274 346 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 THY1P04216 161 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 STSP08842 583 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 GNLYP22749 145 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 ACVR2AP27037 513 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 SHC1P29353 583 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 RBM34P42696 430 aaKnown RBP12.84□□□□□ -0.35
CHD8-208ENST00000555301 CA7P43166 264 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 EIF1AXP47813 144 aaKnown RBP12.84□□□□□ -0.35
CHD8-208ENST00000555301 CLDN15P56746 228 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 CARD18P57730 90 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 SMIM11AP58511 58 aa12.84□□□□□ -0.35
CHD8-208ENST00000555301 CSNK2A1P68400 391 aaPredicted RBP12.84□□□□□ -0.35
CHD8-208ENST00000555301 TRAM2Q15035 370 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms