RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 DNAJC9Q8WXX5 260 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 TAAR6Q96RI8 345 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 SECISBP2Q96T21 854 aaKnown RBP9.75□□□□□ -0.85
TDP1-211ENST00000555178 TSPAN10Q9H1Z9 355 aaPredicted RBP9.75□□□□□ -0.85
TDP1-211ENST00000555178 TIMMDC1Q9NPL8 285 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 MED17Q9NVC6 651 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 SMPD3Q9NY59 655 aaPredicted RBP9.75□□□□□ -0.85
TDP1-211ENST00000555178 TAS2R10Q9NYW0 307 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 ABI3Q9P2A4 366 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 OSGIN1Q9UJX0 560 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 RPH3AQ9Y2J0 694 aaPredicted RBP9.75□□□□□ -0.85
TDP1-211ENST00000555178 PCDHGB5Q9Y5G0 923 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 CFAP46Q8IYW2 2715 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 IGLV3-32A0A0A0MS00 114 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 ZC3H12DA2A288 527 aaKnown RBP9.75□□□□□ -0.85
TDP1-211ENST00000555178 ANKRD33BA6NCL7 494 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 CDC42EP2O14613 210 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 ZIC3O60481 467 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 GNAO1P09471 354 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 THRBP10828 461 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 PRKCAP17252 672 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 PGCP20142 388 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 CASRP41180 1078 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 OMPP47874 163 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 SLC6A8P48029 635 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 SMIM11AP58511 58 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 C19orf57Q0VDD7 668 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 SNTA1Q13424 505 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 NHSL2Q5HYW2 709 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 KLHL17Q6TDP4 642 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 IGFL3Q6UXB1 125 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 PLCZ1Q86YW0 608 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 DND1Q8IYX4 353 aaKnown RBP9.75□□□□□ -0.85
TDP1-211ENST00000555178 PACRGLQ8N7B6 248 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 OR4K17Q8NGC6 315 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 ZNF426Q9BUY5 554 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 VCXQ9H320 206 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 RIBC2Q9H4K1 309 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 KRT84Q9NSB2 600 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 TNFRSF10DQ9UBN6 386 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
TDP1-211ENST00000555178 A0A087WUJ7 227 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 TMEM8BA6NDV4 472 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 MKRN2OSH3BPM6 223 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 ITGB2P05107 769 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 MAKP20794 623 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 SHC1P29353 583 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 IFNA8P32881 189 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 EGR4Q05215 589 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 LY6DQ14210 128 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 PLPPR5Q32ZL2 321 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 C1QL3Q5VWW1 255 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 LINC00114Q6XXX2 140 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 MBOAT2Q6ZWT7 520 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 ALPK2Q86TB3 2170 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 YRDCQ86U90 279 aaKnown RBP9.74□□□□□ -0.85
TDP1-211ENST00000555178 GPALPP1Q8IXQ4 340 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 Q8NA96 180 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 OR1J4Q8NGS1 313 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 CYGBQ8WWM9 190 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 POLR2J2Q9GZM3 115 aaKnown RBP9.74□□□□□ -0.85
TDP1-211ENST00000555178 ADAM19Q9H013 955 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 POLR2J3Q9H1A7 115 aaKnown RBP9.74□□□□□ -0.85
TDP1-211ENST00000555178 UBQLN3Q9H347 655 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 ANKRD19PQ9H560 264 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 EVA1AQ9H8M9 152 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 LIPGQ9Y5X9 500 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 AP4B1Q9Y6B7 739 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 ZGRF1Q86YA3 2104 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 ELOA3DA6NLF2 546 aaPredicted RBP9.74□□□□□ -0.85
TDP1-211ENST00000555178 HPRP00739 348 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 GP1BBP13224 206 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 IFI30P13284 250 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 UQCRBP14927 111 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 MAGEA5P43359 124 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 RPP38P78345 283 aaKnown RBP9.74□□□□□ -0.85
TDP1-211ENST00000555178 ALDH6A1Q02252 535 aaKnown RBP9.74□□□□□ -0.85
TDP1-211ENST00000555178 CRYZQ08257 329 aaKnown RBP9.74□□□□□ -0.85
TDP1-211ENST00000555178 MERTKQ12866 999 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 ELOA3BQ3SY89 546 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 GXYLT1Q4G148 440 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 Q6ZS92 163 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 ASB18Q6ZVZ8 466 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 ELOA3Q8NG57 546 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 DNAJA4Q8WW22 397 aaPredicted RBP9.74□□□□□ -0.85
TDP1-211ENST00000555178 NR4A3Q92570 626 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 C1GALT1C1Q96EU7 318 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 TMEM41AQ96HV5 264 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 PSD2Q9BQI7 771 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 ADI1Q9BV57 179 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 TTTY12Q9BZ98 90 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 OR11A1Q9GZK7 315 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 TMEM185BQ9H7F4 350 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 PAPOLBQ9NRJ5 636 aaKnown RBP9.74□□□□□ -0.85
TDP1-211ENST00000555178 SDHAF3Q9NRP4 125 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 C15orf41Q9Y2V0 281 aa9.74□□□□□ -0.85
TDP1-211ENST00000555178 COL6A6A6NMZ7 2263 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 RELNP78509 3460 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 TMEM72A0PK05 275 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 ARRDC5A6NEK1 342 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms