RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 AURKBQ96GD4 344 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 ZC3HAV1LQ96H79 300 aaKnown RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 ADGRG7Q96K78 797 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 SLC35A5Q9BS91 424 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 VCX3BQ9H321 246 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 TMEM38AQ9H6F2 299 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 Q9N2J8 555 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 EQTNQ9NQ60 294 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 NKX1-2Q9UD57 310 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 EGFL7Q9UHF1 273 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 AP4S1Q9Y587 144 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 DNHD1Q96M86 4753 aa9.46□□□□□ -0.89
SHMT2-215ENST00000554656 TCRBV5S2A0A599 114 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 DHRS12A0PJE2 317 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 C16orf97H3BN30 126 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 CXCR6O00574 342 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 SMPD2O60906 423 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 NKX2-2O95096 273 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 OXSR1O95747 527 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-215ENST00000554656 ANGPTL1O95841 491 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 FCGR1AP12314 374 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 PCGF2P35227 344 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 VHLP40337 213 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 MVDP53602 400 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 ACKR1Q16570 336 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 CYP51A1Q16850 503 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.46□□□□□ -0.9
SHMT2-215ENST00000554656 GLYR1Q49A26 553 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-215ENST00000554656 INTS11Q5TA45 600 aaKnown RBP9.46□□□□□ -0.9
SHMT2-215ENST00000554656 FAM214BQ7L5A3 538 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 PQLC1Q8N2U9 271 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 GATSQ8NAP1 163 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 C11orf65Q8NCR3 313 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 HIPK4Q8NE63 616 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 OR56A1Q8NGH5 318 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 OR4C3Q8NH37 302 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 FBXO30Q8TB52 745 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 SLC9A6Q92581 669 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 OTUB1Q96FW1 271 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-215ENST00000554656 Q96MF0 132 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 RNF145Q96MT1 663 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 CCL19Q99731 98 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 TBL1XR1Q9BZK7 514 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 CXorf36Q9H7Y0 433 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 PTGES2Q9H7Z7 377 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 YY1AP1Q9H869 796 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 SDHAF3Q9NRP4 125 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 SIRT3Q9NTG7 399 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-215ENST00000554656 FBXO34Q9NWN3 711 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 ELOVL5Q9NYP7 299 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 ZNF226Q9NYT6 803 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 NTMQ9P121 344 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 GMPR2Q9P2T1 348 aaKnown RBP9.46□□□□□ -0.9
SHMT2-215ENST00000554656 CLEC4AQ9UMR7 237 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 VDAC3Q9Y277 283 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 AP4B1Q9Y6B7 739 aa9.46□□□□□ -0.9
SHMT2-215ENST00000554656 RNF103-CHMP3A0A140T963 221 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 TRIM64A6NGJ6 449 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 TRIM64BA6NI03 449 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 ALG1L2C9J202 215 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 LINC01387J3KSC0 135 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 KLF4O43474 513 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 PLAUP00749 431 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 OPN1LWP04000 364 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 ARAFP10398 606 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 EFNA1P20827 205 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-215ENST00000554656 TBXA2RP21731 343 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 GPC1P35052 558 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 SOAT1P35610 550 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 CHI3L1P36222 383 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-215ENST00000554656 KCNJ5P48544 419 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 PTDSS1P48651 473 aaKnown RBP9.45□□□□□ -0.9
SHMT2-215ENST00000554656 CCT3P49368 545 aaKnown RBP9.45□□□□□ -0.9
SHMT2-215ENST00000554656 C17orf67Q0P5P2 114 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 ZNHIT3Q15649 155 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-215ENST00000554656 EXOC3L2Q2M3D2 409 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 PLPPR5Q32ZL2 321 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 EXOSC6Q5RKV6 272 aaKnown RBP9.45□□□□□ -0.9
SHMT2-215ENST00000554656 CYP2R1Q6VVX0 501 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 STAC2Q6ZMT1 411 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 LRRC74BQ6ZQY2 392 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 PRIMA1Q86XR5 153 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 PTOV1Q86YD1 416 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 P3H2Q8IVL5 708 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 ADGRG5Q8IZF4 528 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 OR10D3Q8NH80 312 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 POC1BQ8TC44 478 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 FAM110BQ8TC76 370 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 MIPOL1Q8TD10 442 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 CANT1Q8WVQ1 401 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 PERPQ96FX8 193 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 KLHL4Q9C0H6 718 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 MAGIXQ9H6Y5 334 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 C3orf14Q9HBI5 128 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 DCAF13Q9NV06 445 aaKnown RBP9.45□□□□□ -0.9
SHMT2-215ENST00000554656 RPS6KA6Q9UK32 745 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 PROCRQ9UNN8 238 aa9.45□□□□□ -0.9
SHMT2-215ENST00000554656 SAMD4AQ9UPU9 718 aaKnown RBP9.45□□□□□ -0.9
SHMT2-215ENST00000554656 CR1P17927 2039 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 CADP27708 2225 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms