RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ADAM11O75078 769 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 FESP07332 822 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 CD1EP15812 388 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 CXCR1P25024 350 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 TACR3P29371 465 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 UGT2B10P36537 528 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 DIO1P49895 249 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 POLR2HP52434 150 aaKnown RBP9.51□□□□□ -0.89
SHMT2-213ENST00000554600 OR2B6P58173 313 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 GUCY1A3Q02108 690 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 PLAURQ03405 335 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 EPS8Q12929 822 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 DAZAP2Q15038 168 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-213ENST00000554600 GUSBP1Q15486 140 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 AP1ARQ63HQ0 302 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 ALKBH2Q6NS38 261 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 TMPPEQ6ZT21 453 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 BEND4Q6ZU67 534 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 DHDDSQ86SQ9 333 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 CDC20BQ86Y33 519 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 ADGRG3Q86Y34 549 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 MSRB3Q8IXL7 192 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 SLC43A2Q8N370 569 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 BBS10Q8TAM1 723 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-213ENST00000554600 WFIKKN1Q96NZ8 548 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 CCDC106Q9BWC9 280 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 A4GALTQ9NPC4 353 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 PLSCR4Q9NRQ2 329 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 TMEM45AQ9NWC5 275 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 ZNF226Q9NYT6 803 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 VAPAQ9P0L0 249 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 KLHL9Q9P2J3 617 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 KLHL13Q9P2N7 655 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 CORO2BQ9UQ03 480 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 IFT52Q9Y366 437 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 TMED7Q9Y3B3 224 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 DSPPQ9NZW4 1301 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 PLCE1Q9P212 2302 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 CDHR4A6H8M9 788 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 SMAD9O15198 467 aaKnown RBP9.5□□□□□ -0.89
SHMT2-213ENST00000554600 FRS3O43559 492 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 YES1P07947 543 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 THBS1P07996 1170 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 ARAFP10398 606 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 HOXB9P17482 250 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-213ENST00000554600 KLK2P20151 261 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 SLC1A3P43003 542 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 ARFIP2P53365 341 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 CDK6Q00534 326 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 NFYCQ13952 458 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 CYP51A1Q16850 503 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 ZSWIM7Q19AV6 140 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 KRTAP21-3Q3LHN1 58 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 NUFIP2Q7Z417 695 aaKnown RBP9.5□□□□□ -0.89
SHMT2-213ENST00000554600 LSRQ86X29 649 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-213ENST00000554600 KRT73Q86Y46 540 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 CLIP4Q8N3C7 705 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 STON2Q8WXE9 905 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 DDIT4LQ96D03 193 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 ARL5BQ96KC2 179 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 TACO1Q9BSH4 297 aaKnown RBP9.5□□□□□ -0.89
SHMT2-213ENST00000554600 SPATA9Q9BWV2 254 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 SLC52A3Q9NQ40 469 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 OSGIN1Q9UJX0 560 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 EDARQ9UNE0 448 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 HDGFL3Q9Y3E1 203 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 TESMINQ9Y4I5 508 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 ALPK2Q86TB3 2170 aa9.5□□□□□ -0.89
SHMT2-213ENST00000554600 TMEM72A0PK05 275 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 FAAHO00519 579 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 CYTIPO60759 359 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 PGM3O95394 542 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 BMP2P12643 396 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 PRG2P13727 222 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 SLC6A2P23975 617 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 FKBP2P26885 142 aaKnown RBP9.49□□□□□ -0.89
SHMT2-213ENST00000554600 AQP1P29972 269 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 DNAJA1P31689 397 aaKnown RBP9.49□□□□□ -0.89
SHMT2-213ENST00000554600 CCKARP32238 428 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 CLK1P49759 484 aaKnown RBP9.49□□□□□ -0.89
SHMT2-213ENST00000554600 SCARB2Q14108 478 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 RNF220Q5VTB9 566 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 PRAMEF8Q5VWM4 474 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 PRAMEF7Q5VXH5 474 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 WBP2NLQ6ICG8 309 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 REEP3Q6NUK4 255 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.49□□□□□ -0.89
SHMT2-213ENST00000554600 SERPINA11Q86U17 422 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 MTDHQ86UE4 582 aaKnown RBP9.49□□□□□ -0.89
SHMT2-213ENST00000554600 WFDC8Q8IUA0 241 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 ZNF100Q8IYN0 542 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 PIK3IP1Q96FE7 263 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 ZNF300Q96RE9 604 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-213ENST00000554600 ZNF607Q96SK3 696 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 SPATA5L1Q9BVQ7 753 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 LIME1Q9H400 295 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 IKZF5Q9H5V7 419 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 GP6Q9HCN6 339 aa9.49□□□□□ -0.89
SHMT2-213ENST00000554600 BCL2L10Q9HD36 194 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms