RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 CCDC106Q9BWC9 280 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 QRSL1Q9H0R6 528 aaKnown RBP7.77□□□□□ -1.17
ACTN1-213ENST00000554508 RAD21L1Q9H4I0 556 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF385DQ9H6B1 395 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 C12orf49Q9H741 205 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 TPT1P8Q9HAU6 139 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 BCO1Q9HAY6 547 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 CTPS2Q9NRF8 586 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 MRGBPQ9NV56 204 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 C6orf203Q9P0P8 240 aaPredicted RBP7.77□□□□□ -1.17
ACTN1-213ENST00000554508 P2RX2Q9UBL9 471 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 CHRNA9Q9UGM1 479 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 HDGFL3Q9Y3E1 203 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 RAI1Q7Z5J4 1906 aaPredicted RBP7.77□□□□□ -1.17
ACTN1-213ENST00000554508 VPS13CQ709C8 3753 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 A0A0G2JPF8 293 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 A0A1W2PPR1 153 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF724A8MTY0 619 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 HNRNPCL2B2RXH8 293 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 HNRNPCL3B7ZW38 293 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 FAAHO00519 579 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 ANGPT2O15123 496 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 SMAD9O15198 467 aaKnown RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 SIAH2O43255 324 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 DNPH1O43598 174 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 CYTIPO60759 359 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 HNRNPCL1O60812 293 aaKnown RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 CCDC22O60826 627 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 PMS2P2O95744 297 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 TFPTP0C1Z6 253 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 HNRNPCL4P0DMR1 293 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 TFPIP10646 304 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 FPR1P21462 350 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 CRATP43155 626 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 OR3A2P47893 321 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 IDH2P48735 452 aaKnown RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 DIO1P49895 249 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 MVDP53602 400 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 CRISP3P54108 245 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 DSTNP60981 165 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 P2RY6Q15077 328 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 PDK3Q15120 406 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 BEX5Q5H9J7 111 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 C6orf10Q5SRN2 563 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 GKAP1Q5VSY0 366 aaPredicted RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 SLC2A7Q6PXP3 512 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 TFAP2EQ6VUC0 442 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 DNAJC14Q6Y2X3 702 aaPredicted RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 NUFIP2Q7Z417 695 aaKnown RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 PIGWQ7Z7B1 504 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 MTDHQ86UE4 582 aaKnown RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 ADGRG3Q86Y34 549 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 TGIF2LYQ8IUE0 185 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 FUNDC1Q8IVP5 155 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 GABRG1Q8N1C3 465 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 PNPT1Q8TCS8 783 aaKnown RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 CNOT9Q92600 299 aaKnown RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 GTF2H4Q92759 462 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 PIGTQ969N2 578 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 SPDL1Q96EA4 605 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 ZHX1-C8orf76Q96EF9 292 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 PIK3IP1Q96FE7 263 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 ZC3HAV1LQ96H79 300 aaKnown RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 PSD2Q9BQI7 771 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 TMUB1Q9BVT8 246 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 SAR1AQ9NR31 198 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 SLC6A13Q9NSD5 602 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 TMEM45AQ9NWC5 275 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 BEX4Q9NWD9 120 aaPredicted RBP7.76□□□□□ -1.17
ACTN1-213ENST00000554508 ARMCX1Q9P291 453 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF232Q9UNY5 417 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 TRAPPC4Q9Y296 219 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 CADP27708 2225 aa7.76□□□□□ -1.17
ACTN1-213ENST00000554508 TMED7-TICAM2A0A0A6YYA0 188 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 IGHV3-15A0A0B4J1V0 119 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 CFAP73A6NFT4 308 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 CLDN24A6NM45 220 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 CLIC1O00299 241 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 GPR171O14626 319 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF208O43345 1280 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 KLF4O43474 513 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 BCAS1O75363 584 aaPredicted RBP7.75□□□□□ -1.17
ACTN1-213ENST00000554508 GCM2O75603 506 aaPredicted RBP7.75□□□□□ -1.17
ACTN1-213ENST00000554508 CNOT4O95628 575 aaKnown RBP7.75□□□□□ -1.17
ACTN1-213ENST00000554508 FAM107AO95990 144 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 THBDP07204 575 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 ETFAP13804 333 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 CD99P14209 185 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 CD53P19397 219 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 LOXP28300 417 aaPredicted RBP7.75□□□□□ -1.17
ACTN1-213ENST00000554508 SLC1A3P43003 542 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 POLR2HP52434 150 aaKnown RBP7.75□□□□□ -1.17
ACTN1-213ENST00000554508 NR1H2P55055 460 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 PLAURQ03405 335 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 EPS8Q12929 822 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 KLF10Q13118 480 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 FADDQ13158 208 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 ITGADQ13349 1161 aa7.75□□□□□ -1.17
ACTN1-213ENST00000554508 LARS2Q15031 903 aaKnown RBP7.75□□□□□ -1.17
ACTN1-213ENST00000554508 MAPRE2Q15555 327 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms