RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 SLC25A43Q8WUT9 341 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-209ENST00000553949 SLC38A4Q969I6 547 aa11.03□□□□□ -0.64
SHMT2-209ENST00000553949 RELTQ969Z4 430 aa11.03□□□□□ -0.64
SHMT2-209ENST00000553949 WDYHV1Q96HA8 205 aa11.03□□□□□ -0.64
SHMT2-209ENST00000553949 RSRC1Q96IZ7 334 aaKnown RBP11.03□□□□□ -0.64
SHMT2-209ENST00000553949 RIMS3Q9UJD0 308 aa11.03□□□□□ -0.64
SHMT2-209ENST00000553949 SLC7A7Q9UM01 511 aa11.03□□□□□ -0.64
SHMT2-209ENST00000553949 FAM32AQ9Y421 112 aaKnown RBP11.03□□□□□ -0.64
SHMT2-209ENST00000553949 NCKAP5O14513 1909 aa11.03□□□□□ -0.64
SHMT2-209ENST00000553949 A0A087WUJ7 227 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 GJE1A6NN92 205 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 ANKRD65E5RJM6 399 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 H0YC42 278 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 SEC14L5O43304 696 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 SLC19A2O60779 497 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 DIRAS1O95057 198 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 PRSS23O95084 383 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 MT-ND1P03886 318 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 RAP2AP10114 183 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 THRBP10828 461 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 ABOP16442 354 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 HOXB6P17509 224 aaKnown RBP11.02□□□□□ -0.65
SHMT2-209ENST00000553949 FKBP2P26885 142 aaKnown RBP11.02□□□□□ -0.65
SHMT2-209ENST00000553949 SFTPDP35247 375 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 MAGEA2P43356 314 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 TPD52P55327 224 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-209ENST00000553949 CLDN15P56746 228 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 SRYQ05066 204 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 C19orf57Q0VDD7 668 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 ST3GAL3Q11203 375 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 KPNB1Q14974 876 aaKnown RBP11.02□□□□□ -0.65
SHMT2-209ENST00000553949 IGFBP7Q16270 282 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 C3AR1Q16581 482 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 TMEM176BQ3YBM2 270 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-209ENST00000553949 GXYLT1Q4G148 440 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 SYT14P1Q58G82 188 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 WLSQ5T9L3 541 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 LINC00114Q6XXX2 140 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 WDR88Q6ZMY6 472 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 ESPNLQ6ZVH7 1005 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 PIWIL3Q7Z3Z3 882 aaKnown RBP11.02□□□□□ -0.65
SHMT2-209ENST00000553949 ZDHHC21Q8IVQ6 265 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 UBQLNLQ8IYU4 475 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 OFCC1Q8IZS5 231 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 MEIOBQ8N635 442 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 OR5M9Q8NGP3 310 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 FAM57AQ8TBR7 257 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 SLCO4A1Q96BD0 722 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 MPP4Q96JB8 637 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 KLHL15Q96M94 604 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 ZNF347Q96SE7 839 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 PIP5K1AQ99755 562 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 PRSS27Q9BQR3 290 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 FNDC11Q9BVV2 318 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 CHID1Q9BWS9 393 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 OR11A1Q9GZK7 315 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 PRDM14Q9GZV8 571 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 DENND2DQ9H6A0 471 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-209ENST00000553949 PNPLA3Q9NST1 481 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 CCM2LQ9NUG4 571 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-209ENST00000553949 RHCGQ9UBD6 479 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 CAMK2AQ9UQM7 478 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 ZNF835Q9Y2P0 537 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 HEATR5AQ86XA9 2040 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 COL6A6A6NMZ7 2263 aa11.02□□□□□ -0.65
SHMT2-209ENST00000553949 PRRC2CQ9Y520 2896 aaKnown RBP11.02□□□□□ -0.65
SHMT2-209ENST00000553949 CHD6Q8TD26 2715 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 PCNX3Q9H6A9 2034 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 IGKV1D-42A0A075B6H8 117 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 A0A0J9YW62 118 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 ZC3H12DA2A288 527 aaKnown RBP11.01□□□□□ -0.65
SHMT2-209ENST00000553949 A8MVM7 634 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 H0Y3Z8 333 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 EIF1AYO14602 144 aaKnown RBP11.01□□□□□ -0.65
SHMT2-209ENST00000553949 TNFSF11O14788 317 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 ADAMDEC1O15204 470 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 TPOP07202 933 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 TFPIP10646 304 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 FUT4P22083 530 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 SLC7A1P30825 629 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 CLK1P49759 484 aaKnown RBP11.01□□□□□ -0.65
SHMT2-209ENST00000553949 FOXD4Q12950 439 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-209ENST00000553949 CTU2Q2VPK5 515 aaKnown RBP11.01□□□□□ -0.65
SHMT2-209ENST00000553949 EMC4Q5J8M3 183 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 Q6ZPB1 254 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-209ENST00000553949 ZNF605Q86T29 641 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 CD163Q86VB7 1156 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 PM20D2Q8IYS1 436 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 GALNT11Q8NCW6 608 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 PIK3C3Q8NEB9 887 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 OR2V1Q8NHB1 315 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 DDIT4LQ96D03 193 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 ADGRG7Q96K78 797 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 NMNAT1Q9HAN9 279 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-209ENST00000553949 MAN2C1Q9NTJ4 1040 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 FAM208BQ5VWN6 2430 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 CFAP46Q8IYW2 2715 aa11.01□□□□□ -0.65
SHMT2-209ENST00000553949 A0A1W2PNR3 127 aa11□□□□□ -0.65
SHMT2-209ENST00000553949 PRRG2O14669 202 aa11□□□□□ -0.65
SHMT2-209ENST00000553949 RRP9O43818 475 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms