RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 SSX1Q16384 188 aa11.65□□□□□ -0.54
VIPAS39-206ENST00000553888 AADACL4Q5VUY2 407 aa11.65□□□□□ -0.54
VIPAS39-206ENST00000553888 ART5Q96L15 291 aa11.65□□□□□ -0.54
VIPAS39-206ENST00000553888 MGLLQ99685 303 aa11.65□□□□□ -0.54
VIPAS39-206ENST00000553888 LSM2Q9Y333 95 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-206ENST00000553888 SAGE2PA6NJ88 616 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 VSTM2BA6NLU5 285 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 FAM25EA8MYX2 175 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 B4DXG7 233 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 GYPBP06028 91 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 CELA2AP08217 269 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 FGF5P12034 268 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 BMP7P18075 431 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 DUSP3P51452 185 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 SLC25A30Q5SVS4 291 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 BICRALQ6AI39 1079 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 SLC46A3Q7Z3Q1 461 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 LINC00469Q8N7U9 141 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 OR52L1Q8NGH7 329 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 TBC1D15Q8TC07 691 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 METTL21AQ8WXB1 218 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 FCGR1BQ92637 280 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 OPALINQ96PE5 141 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 TMA7Q9Y2S6 64 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 TMEM200CA6NKL6 621 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 ITPKBP27987 946 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 GRK6P43250 576 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 MTNR1AP48039 350 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 RGS6P49758 472 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 ENTPD1P49961 510 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 FOXK2Q01167 660 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 MEDAGQ5VYS4 303 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 CXXC5Q7LFL8 322 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 LHFPL3Q86UP9 236 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 AGBL5Q8NDL9 886 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 CHCHD6Q9BRQ6 235 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 ULBP3Q9BZM4 244 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 ADAM18Q9Y3Q7 739 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 HRH3Q9Y5N1 445 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
VIPAS39-206ENST00000553888 KNTC1P50748 2209 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 MCIDASD6RGH6 385 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 AIREO43918 545 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 CPNE3O75131 537 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 NUDT14O95848 222 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 NCF4Q15080 339 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ZNF362Q5T0B9 420 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 SIRT6Q8N6T7 355 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 CLDN22Q8N7P3 220 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ZNF563Q8TA94 476 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 MR1Q95460 341 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 MOGAT1Q96PD6 335 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 NPAS1Q99742 590 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 TBL1XR1Q9BZK7 514 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 HOXD1Q9GZZ0 328 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 GALNT9Q9HCQ5 603 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 QPCTLQ9NXS2 382 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 PMF1-BGLAPU3KQ54 211 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 SDK2Q58EX2 2172 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 A0A1B0GVG6 124 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ELOA3DA6NLF2 546 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 TO15178 435 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 RAB36O95755 333 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ARPC4P59998 168 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 DCAF7P61962 342 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 EGR4Q05215 589 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 MRPL28Q13084 256 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ELOA3BQ3SY89 546 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 KLHL12Q53G59 568 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 MRPL14Q6P1L8 145 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ZNF367Q7RTV3 350 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 CPEB2Q7Z5Q1 589 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ATG4DQ86TL0 474 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 BPHLQ86WA6 291 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 LNX2Q8N448 690 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 NANOGP1Q8N7R0 232 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ELOA3Q8NG57 546 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 FN3KQ9H479 309 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ERGIC3Q9Y282 383 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 TMEM5Q9Y2B1 443 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 CNTRLQ7Z7A1 2325 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ASPMQ8IZT6 3477 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 DMXL1Q9Y485 3027 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 CDC40O60508 579 aaKnown RBP eCLIP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 TACR3P29371 465 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 EVI2BP34910 448 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ADH7P40394 386 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 RBM34P42696 430 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 CENPAP49450 140 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 CTAG1AP78358 180 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ZNF528Q3MIS6 628 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 C1QL3Q5VWW1 255 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 WBP2NLQ6ICG8 309 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 CYP4Z2PQ8N1L4 340 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ZFP41Q8N8Y5 198 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 GALNT6Q8NCL4 622 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 PTP4A1Q93096 173 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 SGTBQ96EQ0 304 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 CRELD1Q96HD1 420 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms