RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TAF11Q15544 211 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 CD226Q15762 336 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 ACER2Q5QJU3 275 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 WLSQ5T9L3 541 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 ABHD17BQ5VST6 288 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 TMEM81Q6P7N7 255 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 MARCH3Q86UD3 253 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 TGIF2LYQ8IUE0 185 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 RNF138Q8WVD3 245 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 DNAJA4Q8WW22 397 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-208ENST00000553868 ACOT11Q8WXI4 607 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-208ENST00000553868 MPP4Q96JB8 637 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 HS6ST2Q96MM7 605 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 NODALQ96S42 347 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 CTPS2Q9NRF8 586 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 RAB26Q9ULW5 256 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 MGAT4BQ9UQ53 548 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 CARD8Q9Y2G2 431 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 ABCA4P78363 2273 aa13.15□□□□□ -0.3
SHMT2-208ENST00000553868 TRBV4-1A0A0J9YWV2 114 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 SH3PXD2BA1X283 911 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 OR10H3O60404 316 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 TPST2O60704 377 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 ZNF354AO60765 605 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-208ENST00000553868 BCAS1O75363 584 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-208ENST00000553868 OR6B1O95007 311 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 PRKACGP22612 351 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 HTR2AP28223 471 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 MSX1P28360 303 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 RYKP34925 604 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 P2RX1P51575 399 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 CCR4P51679 360 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 PLAURQ03405 335 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 LTBQ06643 244 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 CBFBQ13951 182 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 FCRLBQ6BAA4 426 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 WBP2NLQ6ICG8 309 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 SLC30A6Q6NXT4 461 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 FAHD1Q6P587 224 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 PODNL1Q6PEZ8 512 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 ULK3Q6PHR2 472 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 TBPL2Q6SJ96 375 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 IL20RBQ6UXL0 311 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 APOOLQ6UXV4 268 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 ZNF730Q6ZMV8 503 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 RTL4Q6ZR62 310 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 PRIMA1Q86XR5 153 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 HS3ST5Q8IZT8 346 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 CADM2Q8N3J6 435 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 AMER2Q8N7J2 671 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 OR10G3Q8NGC4 313 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 OR5W2Q8NH69 310 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 B4GALNT2Q8NHY0 566 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 RNF217Q8TC41 542 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 BRIX1Q8TDN6 353 aaKnown RBP13.14□□□□□ -0.31
SHMT2-208ENST00000553868 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 NRGNQ92686 78 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 SMURF2Q9HAU4 748 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 KRT84Q9NSB2 600 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 CNIH4Q9P003 139 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 SLC7A7Q9UM01 511 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 POFUT2Q9Y2G5 429 aa13.14□□□□□ -0.31
SHMT2-208ENST00000553868 MAGED1Q9Y5V3 778 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-208ENST00000553868 FLNAP21333 2647 aaKnown RBP13.14□□□□□ -0.31
SHMT2-208ENST00000553868 A0A1B0GWA3 101 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 CHP2O43745 196 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 ADAP00813 363 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 PNMTP11086 282 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 RBM34P42696 430 aaKnown RBP13.13□□□□□ -0.31
SHMT2-208ENST00000553868 UGT2B15P54855 530 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 ZNF117Q03924 483 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 LAPTM4AQ15012 233 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 NDUFAF6Q330K2 333 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 CMPK2Q5EBM0 449 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 ALG10BQ5I7T1 473 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 SLC22A10Q63ZE4 541 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 KDM4DQ6B0I6 523 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 DESI1Q6ICB0 168 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 RNF113BQ8IZP6 322 aaKnown RBP13.13□□□□□ -0.31
SHMT2-208ENST00000553868 DHRSXQ8N5I4 330 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 SIRT6Q8N6T7 355 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 AQP11Q8NBQ7 271 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 OR4K5Q8NGD3 323 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 ZNF563Q8TA94 476 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 PIGXQ8TBF5 258 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 SLC7A13Q8TCU3 470 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 ARSGQ96EG1 525 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 FEVQ99581 238 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 FUZQ9BT04 418 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 PRR14Q9BWN1 585 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 PAPOLBQ9NRJ5 636 aaKnown RBP13.13□□□□□ -0.31
SHMT2-208ENST00000553868 MAN2C1Q9NTJ4 1040 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 PPP4R1LQ9P1A2 415 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 COL6A5A8TX70 2615 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 STAB1Q9NY15 2570 aa13.13□□□□□ -0.31
SHMT2-208ENST00000553868 A0A0B4J2E0 115 aa13.12□□□□□ -0.31
SHMT2-208ENST00000553868 A0A1B0GX12 115 aa13.12□□□□□ -0.31
SHMT2-208ENST00000553868 C7orf72A4D263 438 aa13.12□□□□□ -0.31
SHMT2-208ENST00000553868 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
SHMT2-208ENST00000553868 FAM47E-STBD1D6RA91 191 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms