RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 MFSD2BA6NFX1 497 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 PCP4L1A6NKN8 68 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 B4DXG7 233 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 WASH3PC4AMC7 463 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 NPIPA5E9PKD4 350 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 H3BTX0 84 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 EI24O14681 340 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 SH2D1BO14796 132 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 PALMO75781 387 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 OPN1MWP04001 364 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 PCCAP05165 728 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 KRT8P05787 483 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 ANXA4P09525 319 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 OPN1MW2P0DN77 364 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 OPN1MW3P0DN78 364 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 TSPAN8P19075 237 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 FUT1P19526 365 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 IDSP22304 550 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 SSR1P43307 286 aaKnown RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 SLC26A2P50443 739 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 EFNA3P52797 238 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 DIO3P55073 304 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 LRRC74AQ0VAA2 488 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 RIPK1Q13546 671 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 SHHQ15465 462 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 PDK4Q16654 411 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 KYAT1Q16773 422 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 TATDN3Q17R31 274 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 LRRC26Q2I0M4 334 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 GLYR1Q49A26 553 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 NADK2Q4G0N4 442 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 CCDC152Q4G0S7 254 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 BEND6Q5SZJ8 279 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 Q6P435 159 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 WASH2PQ6VEQ5 465 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 DPY19L2P2Q6ZN68 376 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 MOB1BQ7L9L4 216 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 ERASQ7Z444 233 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 RANBP3LQ86VV4 465 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 ERO1BQ86YB8 467 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 GCNT2Q8N0V5 402 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 FADS6Q8N9I5 356 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 RELL2Q8NC24 303 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 STKLD1Q8NE28 680 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 WDR36Q8NI36 951 aaKnown RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 SHC3Q92529 594 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 FAM104AQ969W3 186 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 MRPL38Q96DV4 380 aaKnown RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 MRPL53Q96EL3 112 aaKnown RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 DTNBP1Q96EV8 351 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 CFAP53Q96M91 514 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 PLEKHF1Q96S99 279 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 CCT7Q99832 543 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 ERP44Q9BS26 406 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 CRACR2AQ9BSW2 395 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 TBCDQ9BTW9 1192 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 NFKBIZQ9BYH8 718 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 TMEM117Q9H0C3 514 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 OPN3Q9H1Y3 402 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 C11orf49Q9H6J7 331 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 KAT8Q9H7Z6 458 aaKnown RBP2.51□□□□□ -2.01
SCFD1-210ENST00000553693 CD209Q9NNX6 404 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 ESM1Q9NQ30 184 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 C1orf123Q9NWV4 160 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 LHX3Q9UBR4 397 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 ZNF175Q9Y473 711 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 MAD1L1Q9Y6D9 718 aa2.51□□□□□ -2.01
SCFD1-210ENST00000553693 OTOFQ9HC10 1997 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 DNAH12Q6ZR08 3092 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 MAGEB4O15481 346 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-210ENST00000553693 TYROBPO43914 113 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 TBX19O60806 448 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 PDE5AO76074 875 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 WNT2P09544 360 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 ALOX5P09917 674 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 ALPIP09923 528 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 PDHBP11177 359 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 UQCRBP14927 111 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 GLRA2P23416 452 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 HTR2AP28223 471 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 PTPN6P29350 595 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 CHI3L1P36222 383 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-210ENST00000553693 DLSTP36957 453 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 OR1D4P47884 311 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 ALDH3B2P48448 385 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 SULT1E1P49888 294 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 VCPP55072 806 aaKnown RBP2.5□□□□□ -2.01
SCFD1-210ENST00000553693 ACTR1AP61163 376 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 RPS4XP62701 263 aaKnown RBP2.5□□□□□ -2.01
SCFD1-210ENST00000553693 ZNF33BQ06732 778 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 PPIL2Q13356 520 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 MSLNQ13421 630 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-210ENST00000553693 SNTB2Q13425 540 aaKnown RBP2.5□□□□□ -2.01
SCFD1-210ENST00000553693 KLF5Q13887 457 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-210ENST00000553693 ZMYND11Q15326 602 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 TRIP10Q15642 601 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 CD226Q15762 336 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 FILIP1LQ4L180 1135 aa2.5□□□□□ -2.01
SCFD1-210ENST00000553693 TCHHL1Q5QJ38 904 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms