RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 COX5AP20674 150 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 NME5P56597 212 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 RPS4XP62701 263 aaKnown RBP13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 CHRNEQ04844 493 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 LRRC74BQ6ZQY2 392 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 P2RY8Q86VZ1 359 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 PIGXQ8TBF5 258 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 PIWIL2Q8TC59 973 aaKnown RBP13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 MUCL1Q96DR8 90 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 TEX37Q96LM6 180 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 ZNF300Q96RE9 604 aaPredicted RBP13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 PRSS50Q9UI38 385 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 CSPG4Q6UVK1 2322 aa13.4□□□□□ -0.26
SDR39U1-205ENST00000553546 AGAP5A6NIR3 686 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 SNNO75324 88 aaPredicted RBP13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 LYZL6O75951 148 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 KRT75O95678 551 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 IDO1P14902 403 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 EPHA3P29320 983 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 MAP2K6P52564 334 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 SLC18A1P54219 525 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 ATP5J2P56134 94 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 PPA1Q15181 289 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 TIMM23BQ5SRD1 257 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 ZNF621Q6ZSS3 439 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 WDR60Q8WVS4 1066 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 ZNF75CPQ92670 426 aaPredicted RBP13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 ZG16BQ96DA0 208 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 TRMT61AQ96FX7 289 aaKnown RBP13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 SLC38A1Q9H2H9 487 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 MTHFD2LQ9H903 347 aaPredicted RBP13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 PRDM4Q9UKN5 801 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 LAMP3Q9UQV4 416 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 TRAPPC4Q9Y296 219 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 NOSIPQ9Y314 301 aaKnown RBP13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 GPR45Q9Y5Y3 372 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 USF3Q68DE3 2245 aa13.39□□□□□ -0.27
SDR39U1-205ENST00000553546 GOLGA8QA0A0J9YX86 632 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 PRAMEF27A3QJZ7 478 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 GOLGA8OA6NCC3 632 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 C9JVG2 144 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 GOLGA8NF8WBI6 632 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 FAAHO00519 579 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 RFXANKO14593 260 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 EIF1BO60739 113 aaKnown RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 BCAS1O75363 584 aaPredicted RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 LY6G6DO95868 133 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 IL6P05231 212 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 DBIP07108 87 aaKnown RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 CHRM4P08173 479 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 NR2F1P10589 423 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 IL7RP16871 459 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 GGT1P19440 569 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 RPS4Y1P22090 263 aaKnown RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 IL12AP29459 219 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 IDH2P48735 452 aaKnown RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 POLR2HP52434 150 aaKnown RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 SLC16A1P53985 500 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 WDR4P57081 412 aaKnown RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 BSPH1Q075Z2 132 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 STK11Q15831 433 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 ETFDHQ16134 617 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 SYPL1Q16563 259 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 PDCD4Q53EL6 469 aaKnown RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 FBXW9Q5XUX1 488 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 DNAJC14Q6Y2X3 702 aaPredicted RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 ADGRG3Q86Y34 549 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 ZNF440Q8IYI8 595 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 CIARTQ8N365 385 aaPredicted RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 ANKFN1Q8N957 763 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 CNOT9Q92600 299 aaKnown RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 APH1AQ96BI3 265 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 ZNF775Q96BV0 537 aaPredicted RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 DDIT4LQ96D03 193 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 ARL5BQ96KC2 179 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 INPP5KQ9BT40 448 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 WDR55Q9H6Y2 383 aaPredicted RBP13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 NKIRAS1Q9NYS0 192 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 CALML5Q9NZT1 146 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 TMEM181Q9P2C4 612 aa13.38□□□□□ -0.27
SDR39U1-205ENST00000553546 TMED7-TICAM2A0A0A6YYA0 188 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 A0A1W2PP18 115 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 TRIM64A6NGJ6 449 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 TRIM64BA6NI03 449 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 CLDN24A6NM45 220 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 ZNF716A6NP11 495 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 SMAD7O15105 426 aaKnown RBP13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 ZNF208O43345 1280 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 PGM3O95394 542 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 KITP10721 976 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 IGHV1-2P23083 117 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 CDKN2CP42773 168 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 PLAURQ03405 335 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 GSTA3Q16772 222 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 ZNF672Q499Z4 452 aaPredicted RBP13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 NXNQ6DKJ4 435 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 SEZ6L2Q6UXD5 910 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 MSANTD1Q6ZTZ1 278 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 HMGN2P46Q86SG4 172 aa13.37□□□□□ -0.27
SDR39U1-205ENST00000553546 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms