RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MBD6Q96DN6 1003 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 ALPK1Q96QP1 1244 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 BCO1Q9HAY6 547 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 HHATLQ9HCP6 504 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 GLRX2Q9NS18 164 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 CCDC167Q9P0B6 97 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 TMED7Q9Y3B3 224 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 A0A1W2PR80 420 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 FAM234BA2RU67 622 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 ZNF716A6NP11 495 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 H2AFXP16104 143 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-206ENST00000553529 IL7RP16871 459 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 ACAA2P42765 397 aaKnown RBP16.14■□□□□ 0.17
SHMT2-206ENST00000553529 RNPS1Q15287 305 aaKnown RBP16.14■□□□□ 0.17
SHMT2-206ENST00000553529 TAB1Q15750 504 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 BEND4Q6ZU67 534 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 Q71RC1 249 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-206ENST00000553529 GRINAQ7Z429 371 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 OR52P1PQ8NH57 321 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 TMEM234Q8WY98 164 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 TIGARQ9NQ88 270 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 EXOSC3Q9NQT5 275 aaKnown RBP16.14■□□□□ 0.17
SHMT2-206ENST00000553529 DLL4Q9NR61 685 aa16.14■□□□□ 0.17
SHMT2-206ENST00000553529 ZNF443Q9Y2A4 671 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-206ENST00000553529 KRT75O95678 551 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 PSMB1P20618 241 aaKnown RBP16.13■□□□□ 0.17
SHMT2-206ENST00000553529 IGHV1-2P23083 117 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 ADSLP30566 484 aaPredicted RBP16.13■□□□□ 0.17
SHMT2-206ENST00000553529 PCYT1AP49585 367 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 OR2B6P58173 313 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 RGNQ15493 299 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 SFRP5Q5T4F7 317 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 SERPINA11Q86U17 422 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 CADM2Q8N3J6 435 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 LILRB1Q8NHL6 650 aaPredicted RBP16.13■□□□□ 0.17
SHMT2-206ENST00000553529 ITCHQ96J02 903 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 WFDC6Q9BQY6 131 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 PRR14Q9BWN1 585 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 MTHFD2LQ9H903 347 aaPredicted RBP16.13■□□□□ 0.17
SHMT2-206ENST00000553529 VAPAQ9P0L0 249 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 P2RX2Q9UBL9 471 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 LIPT1Q9Y234 373 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 ITPR3Q14573 2671 aa16.13■□□□□ 0.17
SHMT2-206ENST00000553529 CDHR4A6H8M9 788 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 POLR3GO15318 223 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-206ENST00000553529 ZCCHC18P0CG32 403 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 PTNP21246 168 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 HOXC12P31275 282 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 APOBEC1P41238 236 aaKnown RBP16.12■□□□□ 0.17
SHMT2-206ENST00000553529 OR3A2P47893 321 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 ACKR1Q16570 336 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 GLIPR1L2Q4G1C9 344 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 ZNF704Q6ZNC4 412 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-206ENST00000553529 STK32CQ86UX6 486 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 CIARTQ8N365 385 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-206ENST00000553529 PERPQ96FX8 193 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 SERINC1Q9NRX5 453 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 NPAP1Q9NZP6 1156 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 KLHL9Q9P2J3 617 aa16.12■□□□□ 0.17
SHMT2-206ENST00000553529 CFAP73A6NFT4 308 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 CLIC1O00299 241 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 DBIP07108 87 aaKnown RBP16.11■□□□□ 0.17
SHMT2-206ENST00000553529 PABPC4LP0CB38 370 aaKnown RBP16.11■□□□□ 0.17
SHMT2-206ENST00000553529 PPP2R2AP63151 447 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 SELPLGQ14242 412 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 STK11Q15831 433 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 AGKQ53H12 422 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 C9orf135Q5VTT2 229 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 GTF2IRD2BQ6EKJ0 949 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 BLOC1S3Q6QNY0 202 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 MTDHQ86UE4 582 aaKnown RBP16.11■□□□□ 0.17
SHMT2-206ENST00000553529 GTF2IRD2Q86UP8 949 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 OR52E4Q8NGH9 312 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 NFKBIDQ8NI38 313 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 DYDC1Q8WWB3 177 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 CCL19Q99731 98 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 RMND5AQ9H871 391 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 GPR52Q9Y2T5 361 aa16.11■□□□□ 0.17
SHMT2-206ENST00000553529 TPST1O60507 370 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 PMS2P2O95744 297 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 FPR1P21462 350 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 IL32P24001 234 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 POLR2HP52434 150 aaKnown RBP16.1■□□□□ 0.17
SHMT2-206ENST00000553529 NKX6-1P78426 367 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-206ENST00000553529 LGALS3BPQ08380 585 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 SPOCK1Q08629 439 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 BEX5Q5H9J7 111 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 Q5PR19 223 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 BHLHA15Q7RTS1 189 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-206ENST00000553529 P3H2Q8IVL5 708 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 PEX5LQ8IYB4 626 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 SLC43A2Q8N370 569 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 KBTBD8Q8NFY9 601 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 CKAP2Q8WWK9 683 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 SPDL1Q96EA4 605 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 ADAM19Q9H013 955 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 INTS9Q9NV88 658 aaKnown RBP16.1■□□□□ 0.17
SHMT2-206ENST00000553529 SEC14L4Q9UDX3 406 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 DCTN4Q9UJW0 460 aa16.1■□□□□ 0.17
SHMT2-206ENST00000553529 A0A096LPI6 279 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms