RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 C11orf65Q8NCR3 313 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 FAM71CQ8NEG0 241 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 FAM222BQ8WU58 562 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 OIT3Q8WWZ8 545 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 ST8SIA1Q92185 356 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 DNAJA3Q96EY1 480 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 OR5B2Q96R09 309 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 PIF1Q9H611 641 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 EMC9Q9Y3B6 208 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 IGHV3-15A0A0B4J1V0 119 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 DNAJA2O60884 412 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 DBIP07108 87 aaKnown RBP21.1■□□□□ 0.97
TDP1-205ENST00000553527 CCNA2P20248 432 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 IDH2P48735 452 aaKnown RBP21.1■□□□□ 0.97
TDP1-205ENST00000553527 RBBP4Q09028 425 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 ADRM1Q16186 407 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 EXOC3L2Q2M3D2 409 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 PRAMEF8Q5VWM4 474 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 PRAMEF7Q5VXH5 474 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 FBXW10Q5XX13 1052 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 ZNF474Q6S9Z5 364 aaPredicted RBP21.1■□□□□ 0.97
TDP1-205ENST00000553527 C16orf89Q6UX73 402 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 PLEKHM3Q6ZWE6 761 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 VRK2Q86Y07 508 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 PTOV1Q86YD1 416 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 BBS10Q8TAM1 723 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 GMPPAQ96IJ6 420 aaPredicted RBP21.1■□□□□ 0.97
TDP1-205ENST00000553527 CACYBPQ9HB71 228 aaKnown RBP21.1■□□□□ 0.97
TDP1-205ENST00000553527 SPAG4Q9NPE6 437 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 ACER3Q9NUN7 267 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 CMTM6Q9NX76 183 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 DNAJB12Q9NXW2 375 aaKnown RBP21.1■□□□□ 0.97
TDP1-205ENST00000553527 ANGPT4Q9Y264 503 aa21.1■□□□□ 0.97
TDP1-205ENST00000553527 POLQO75417 2590 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 AP3D1O14617 1153 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 ADAM11O75078 769 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 CGAP01215 116 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 TFPIP10646 304 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 EPXP11678 715 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 SLC25A3Q00325 362 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 SORDQ00796 357 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 PLAURQ03405 335 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 ZNF239Q16600 458 aaKnown RBP21.09■□□□□ 0.97
TDP1-205ENST00000553527 MRPL2Q5T653 305 aaKnown RBP21.09■□□□□ 0.97
TDP1-205ENST00000553527 GTF2IRD2BQ6EKJ0 949 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 REEP3Q6NUK4 255 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 GTF2IRD2Q86UP8 949 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 LSRQ86X29 649 aaPredicted RBP21.09■□□□□ 0.97
TDP1-205ENST00000553527 CALHM3Q86XJ0 350 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 SLC15A3Q8IY34 581 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 PGAM4Q8N0Y7 254 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 OR52P1PQ8NH57 321 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 ABHD3Q8WU67 409 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 NRGNQ92686 78 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 CPNE4Q96A23 557 aaPredicted RBP21.09■□□□□ 0.97
TDP1-205ENST00000553527 POLDIP3Q9BY77 421 aaKnown RBP21.09■□□□□ 0.97
TDP1-205ENST00000553527 C12orf49Q9H741 205 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 COQ10BQ9H8M1 238 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 CTPS2Q9NRF8 586 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 RLIMQ9NVW2 624 aa21.09■□□□□ 0.97
TDP1-205ENST00000553527 DSPPQ9NZW4 1301 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 A0A0G2JPF8 293 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 FAM220BPB1ANY3 271 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 B2RBV5 119 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 HNRNPCL2B2RXH8 293 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 HNRNPCL3B7ZW38 293 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 NME4O00746 187 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 HNRNPCL1O60812 293 aaKnown RBP21.08■□□□□ 0.97
TDP1-205ENST00000553527 CTAG2O75638 210 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 HNRNPCL4P0DMR1 293 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 T-ENOLP0DO92 83 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 POU2F1P14859 743 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 PCGF2P35227 344 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 GZMMP51124 257 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 GUSBP1Q15486 140 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 C3orf33Q6P1S2 294 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 SLC30A8Q8IWU4 369 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 HIPK4Q8NE63 616 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 PMM1Q92871 262 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 BCL2L10Q9HD36 194 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 EXOSC3Q9NQT5 275 aaKnown RBP21.08■□□□□ 0.97
TDP1-205ENST00000553527 ADA2Q9NZK5 511 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 ABCD2Q9UBJ2 740 aa21.08■□□□□ 0.97
TDP1-205ENST00000553527 ANKHD1Q8IWZ3 2542 aaKnown RBP21.08■□□□□ 0.96
TDP1-205ENST00000553527 A6NNC1 897 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 ETV2O00321 342 aaPredicted RBP21.07■□□□□ 0.96
TDP1-205ENST00000553527 SS18L1O75177 396 aaPredicted RBP21.07■□□□□ 0.96
TDP1-205ENST00000553527 PGM3O95394 542 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 PABPC4LP0CB38 370 aaKnown RBP21.07■□□□□ 0.96
TDP1-205ENST00000553527 CD8BP10966 210 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 NID1P14543 1247 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 RPS4Y1P22090 263 aaKnown RBP21.07■□□□□ 0.96
TDP1-205ENST00000553527 ENPP1P22413 925 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 CD79BP40259 229 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 APOBEC1P41238 236 aaKnown RBP21.07■□□□□ 0.96
TDP1-205ENST00000553527 LIPEQ05469 1076 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 VMACQ2NL98 169 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 ERICH5Q6P6B1 374 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 FCRLAQ7L513 359 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 CMIPQ8IY22 773 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms