RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 SRXN1Q9BYN0 137 aa12.66□□□□□ -0.38
PTCH1-226ENST00000553011 OR11A1Q9GZK7 315 aa12.66□□□□□ -0.38
PTCH1-226ENST00000553011 CHRNA9Q9UGM1 479 aa12.66□□□□□ -0.38
PTCH1-226ENST00000553011 TAGLN3Q9UI15 199 aa12.66□□□□□ -0.38
PTCH1-226ENST00000553011 TMED7Q9Y3B3 224 aa12.66□□□□□ -0.38
PTCH1-226ENST00000553011 ZNF175Q9Y473 711 aa12.66□□□□□ -0.38
PTCH1-226ENST00000553011 TMEM72A0PK05 275 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 C19orf84I3L1E1 186 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 TFPIP10646 304 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 CD247P20963 164 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 CTSSP25774 331 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 HTR2AP28223 471 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 SLC7A1P30825 629 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 HTR3AP46098 478 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 KCNJ5P48544 419 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 CARD18P57730 90 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 RGS8P57771 180 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-226ENST00000553011 VEZF1Q14119 521 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 SYT14P1Q58G82 188 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 WBP2NLQ6ICG8 309 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 CCDC80Q76M96 950 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 RELL2Q8NC24 303 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-226ENST00000553011 SLC35B4Q969S0 331 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 ZFP3Q96NJ6 502 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 ADAM19Q9H013 955 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 SLC13A4Q9UKG4 626 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 MCTS1Q9ULC4 181 aaKnown RBP12.65□□□□□ -0.38
PTCH1-226ENST00000553011 AP3M1Q9Y2T2 418 aa12.65□□□□□ -0.38
PTCH1-226ENST00000553011 KLF2Q9Y5W3 355 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-226ENST00000553011 ELOVL7A1L3X0 281 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 M0R3H8 397 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 SYT5O00445 386 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 NDUFAB1O14561 156 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 DVL2O14641 736 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 TPST2O60704 377 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 SYNGR4O95473 234 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 LGI1O95970 557 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 GSK3BP49841 420 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 BNIP2Q12982 314 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 BHLHE22Q8NFJ8 381 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-226ENST00000553011 BCAS4Q8TDM0 211 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 SLC26A7Q8TE54 656 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 SLC25A43Q8WUT9 341 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-226ENST00000553011 ROBO4Q8WZ75 1007 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 C3orf49Q96BT1 292 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 ARL5BQ96KC2 179 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 ARHGDIGQ99819 225 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 PRRG4Q9BZD6 226 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 KCNJ16Q9NPI9 418 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 PAQR5Q9NXK6 330 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-226ENST00000553011 KLHL28Q9NXS3 571 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 ABCD2Q9UBJ2 740 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 PACSIN3Q9UKS6 424 aa12.64□□□□□ -0.39
PTCH1-226ENST00000553011 SPIN1Q9Y657 262 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-226ENST00000553011 CRYBG3Q68DQ2 2970 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 ABCA12Q86UK0 2595 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 IGHV3-15A0A0B4J1V0 119 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 A0A1W2PNV4 684 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 ZC3H12DA2A288 527 aaKnown RBP12.63□□□□□ -0.39
PTCH1-226ENST00000553011 FCGR2AP12318 317 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 KLK2P20151 261 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 CXCR1P25024 350 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 OPRM1P35372 400 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 SIRPAP78324 504 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 SLC25A3Q00325 362 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 TFF3Q07654 80 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 MYBPHQ13203 477 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 KRT72Q14CN4 511 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 ZNF239Q16600 458 aaKnown RBP12.63□□□□□ -0.39
PTCH1-226ENST00000553011 NRF1Q16656 503 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 SLC25A35Q3KQZ1 300 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 LRRC23Q53EV4 343 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-226ENST00000553011 OR2A2Q6IF42 318 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 TMPPEQ6ZT21 453 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 CNEP1R1Q8N9A8 125 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 OR52E4Q8NGH9 312 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 OR4D11Q8NGI4 311 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 CPNE4Q96A23 557 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-226ENST00000553011 ALG2Q9H553 416 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 RNF122Q9H9V4 155 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 TIGARQ9NQ88 270 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 ADA2Q9NZK5 511 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 TMEM181Q9P2C4 612 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 ZNF629Q9UEG4 869 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-226ENST00000553011 CLEC4AQ9UMR7 237 aa12.63□□□□□ -0.39
PTCH1-226ENST00000553011 ADGRG4Q8IZF6 3080 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 PRR14LQ5THK1 2151 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 A0A1B0GWA3 101 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 TMEM229AB2RXF0 380 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 SULT2B1O00204 365 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 ZNF208O43345 1280 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 TNFSF13O75888 250 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 IL18BPO95998 194 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 FESP07332 822 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 C8BP07358 591 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 ENPP1P22413 925 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 KDELR2P33947 212 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 KIR2DL2P43627 348 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-226ENST00000553011 DIO1P49895 249 aa12.62□□□□□ -0.39
PTCH1-226ENST00000553011 RAC3P60763 192 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms