RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PGGHGQ32M88 737 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 TMEM201Q5SNT2 666 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 DCST2Q5T1A1 773 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 CCNJQ5T5M9 372 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 TNFAIP8L2Q6P589 184 aaPredicted RBP10.51□□□□□ -0.73
CKAP4-202ENST00000552828 SLC2A7Q6PXP3 512 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 C16orf62Q7Z3J2 963 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 NUFIP2Q7Z417 695 aaKnown RBP10.51□□□□□ -0.73
CKAP4-202ENST00000552828 RNF130Q86XS8 419 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 HIPK1Q86Z02 1210 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 TUSC5Q8IXB3 177 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 MAPK1IP1LQ8NDC0 245 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 XAGE5Q8WWM1 108 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 GTF2H4Q92759 462 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 SH3YL1Q96HL8 342 aaPredicted RBP10.51□□□□□ -0.73
CKAP4-202ENST00000552828 REXO5Q96IC2 774 aaKnown RBP10.51□□□□□ -0.73
CKAP4-202ENST00000552828 SRXN1Q9BYN0 137 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 TRIM2Q9C040 744 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 SLCO5A1Q9H2Y9 848 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 SERHL2Q9H4I8 314 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF385DQ9H6B1 395 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 ICAM5Q9UMF0 924 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 LIPT1Q9Y234 373 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 RRP15Q9Y3B9 282 aaKnown RBP10.51□□□□□ -0.73
CKAP4-202ENST00000552828 MAGED1Q9Y5V3 778 aaPredicted RBP10.51□□□□□ -0.73
CKAP4-202ENST00000552828 KCNE3Q9Y6H6 103 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 NBEAL1Q6ZS30 2694 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 ANK2Q01484 3957 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 SVEP1Q4LDE5 3571 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 A0A096LPI6 279 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 A0A1W2PP18 115 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 DPRXA6NFQ7 191 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 GJE1A6NN92 205 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF814B7Z6K7 855 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ETV2O00321 342 aaPredicted RBP10.5□□□□□ -0.73
CKAP4-202ENST00000552828 CLOCKO15516 846 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 NTN1O95631 604 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ADAP00813 363 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 CD8AP01732 235 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 IGHV4-39P01824 125 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 FESP07332 822 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 IL32P24001 234 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 LSP1P33241 339 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 SFTPDP35247 375 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ACVR1BP36896 505 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 MAGEA8P43361 318 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 SUMO3P55854 103 aaPredicted RBP10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF117Q03924 483 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 BSPH1Q075Z2 132 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 FOXF1Q12946 379 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ITGADQ13349 1161 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 TSC22D1Q15714 1073 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ARHGAP11BQ3KRB8 267 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 KLHL26Q53HC5 615 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 Q6ZT83 130 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 FCRLAQ7L513 359 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 SLC43A2Q8N370 569 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF527Q8NB42 609 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ZFP90Q8TF47 636 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 TSPEARQ8WU66 669 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 NEUROG1Q92886 237 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 RAB8BQ92930 207 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 KISS1RQ969F8 398 aaPredicted RBP10.5□□□□□ -0.73
CKAP4-202ENST00000552828 GTPBP3Q969Y2 492 aaKnown RBP10.5□□□□□ -0.73
CKAP4-202ENST00000552828 SDF2Q99470 211 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 POTEKPQ9BYX7 375 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 NSRP1Q9H0G5 558 aaKnown RBP10.5□□□□□ -0.73
CKAP4-202ENST00000552828 TPT1P8Q9HAU6 139 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 BCO1Q9HAY6 547 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 SLC52A3Q9NQ40 469 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 SLC6A13Q9NSD5 602 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ING1Q9UK53 422 aaPredicted RBP10.5□□□□□ -0.73
CKAP4-202ENST00000552828 NDUFAF1Q9Y375 327 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 PCDHB14Q9Y5E9 798 aa10.5□□□□□ -0.73
CKAP4-202ENST00000552828 GPC6Q9Y625 555 aaPredicted RBP10.5□□□□□ -0.73
CKAP4-202ENST00000552828 ABCA1O95477 2261 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 GMNCA6NCL1 334 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 HMGN4O00479 90 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 ANGPT2O15123 496 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 STX11O75558 287 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 TP53P04637 393 aaPredicted RBP10.49□□□□□ -0.73
CKAP4-202ENST00000552828 CDKN1AP38936 164 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 SEC24CP53992 1094 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 GNGT1P63211 74 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 TMEM176BQ3YBM2 270 aaPredicted RBP10.49□□□□□ -0.73
CKAP4-202ENST00000552828 SLC25A53Q5H9E4 307 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 ALKBH2Q6NS38 261 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 HMBOX1Q6NT76 420 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 PODNL1Q6PEZ8 512 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 CBLN3Q6UW01 205 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 SSX8Q7RTT4 187 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 ATG4DQ86TL0 474 aaPredicted RBP10.49□□□□□ -0.73
CKAP4-202ENST00000552828 DTX2Q86UW9 622 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 FBXO27Q8NI29 283 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 PNPT1Q8TCS8 783 aaKnown RBP10.49□□□□□ -0.73
CKAP4-202ENST00000552828 GPR119Q8TDV5 335 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 C10orf82Q8WW14 230 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 TRAF4Q9BUZ4 470 aaPredicted RBP10.49□□□□□ -0.73
CKAP4-202ENST00000552828 PAIP1Q9H074 479 aaKnown RBP10.49□□□□□ -0.73
CKAP4-202ENST00000552828 RAD21L1Q9H4I0 556 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms