RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 DPP10Q8N608 796 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 ZNF775Q96BV0 537 aaPredicted RBP6.78□□□□□ -1.32
ERBB3-218ENST00000551176 ANKRD27Q96NW4 1050 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 DACH2Q96NX9 599 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 ZNF317Q96PQ6 595 aaPredicted RBP6.78□□□□□ -1.32
ERBB3-218ENST00000551176 ZNF300Q96RE9 604 aaPredicted RBP6.78□□□□□ -1.32
ERBB3-218ENST00000551176 PSD2Q9BQI7 771 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 WFDC6Q9BQY6 131 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 SIKE1Q9BRV8 207 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 SLC39A3Q9BRY0 314 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 SPATA9Q9BWV2 254 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 POLDIP3Q9BY77 421 aaKnown RBP6.78□□□□□ -1.32
ERBB3-218ENST00000551176 CLEC4MQ9H2X3 399 aaPredicted RBP6.78□□□□□ -1.32
ERBB3-218ENST00000551176 RABEP2Q9H5N1 569 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 CCDC134Q9H6E4 229 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 TIGARQ9NQ88 270 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 SAR1AQ9NR31 198 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 SERINC1Q9NRX5 453 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 GLRX2Q9NS18 164 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 THUMPD1Q9NXG2 353 aaKnown RBP6.78□□□□□ -1.32
ERBB3-218ENST00000551176 ELOVL5Q9NYP7 299 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 CALML5Q9NZT1 146 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.78□□□□□ -1.32
ERBB3-218ENST00000551176 LEF1Q9UJU2 399 aaPredicted RBP6.78□□□□□ -1.32
ERBB3-218ENST00000551176 PROCRQ9UNN8 238 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 TRIM33Q9UPN9 1127 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 NDUFAF1Q9Y375 327 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 TMED7Q9Y3B3 224 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 EMC9Q9Y3B6 208 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 PCNX1Q96RV3 2341 aa6.78□□□□□ -1.32
ERBB3-218ENST00000551176 PCNX3Q9H6A9 2034 aa6.77□□□□□ -1.32
ERBB3-218ENST00000551176 FREM3P0C091 2139 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 ZNF716A6NP11 495 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 DEFB108AA8MXU0 73 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 C16orf97H3BN30 126 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 FXYD1O00168 92 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 SULT2B1O00204 365 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 PMS2P2O95744 297 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 HRGP04196 525 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 YES1P07947 543 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 TFPIP10646 304 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 POU2F1P14859 743 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 HTR2AP28223 471 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 LOXP28300 417 aaPredicted RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 AQP1P29972 269 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 DNAJA1P31689 397 aaKnown RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 MDH1P40925 334 aaKnown RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 KCNJ5P48544 419 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 GZMMP51124 257 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 POLR2HP52434 150 aaKnown RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 H3F3AP84243 136 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 CDK6Q00534 326 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 BNIP2Q12982 314 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 KLF10Q13118 480 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 GNA13Q14344 377 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 LARS2Q15031 903 aaKnown RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 RNPS1Q15287 305 aaKnown RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 POU4F3Q15319 338 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 TESK1Q15569 626 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 TSC22D1Q15714 1073 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 ZNF311Q5JNZ3 666 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 ABLIM2Q6H8Q1 611 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 DHDDSQ86SQ9 333 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 MTDHQ86UE4 582 aaKnown RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 CCDC103Q8IW40 242 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 GABRG1Q8N1C3 465 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 BBS10Q8TAM1 723 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 SLC25A43Q8WUT9 341 aaPredicted RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 CGREF1Q99674 301 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 PRR14Q9BWN1 585 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 KLHL4Q9C0H6 718 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 RAD21L1Q9H4I0 556 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 TMEM38AQ9H6F2 299 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 PLEKHF2Q9H8W4 249 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 BCO1Q9HAY6 547 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 GP6Q9HCN6 339 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 MED4Q9NPJ6 270 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 C6orf203Q9P0P8 240 aaPredicted RBP6.77□□□□□ -1.33
ERBB3-218ENST00000551176 CELSR1Q9NYQ6 3014 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 CACNA1CQ13936 2221 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 ARHGAP21Q5T5U3 1957 aa6.77□□□□□ -1.33
ERBB3-218ENST00000551176 IGKV3D-15A0A087WSY6 115 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 TMEM229AB2RXF0 380 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 C5orf58C9J3I9 102 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 ANGPT2O15123 496 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 ZNF208O43345 1280 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 TPST2O60704 377 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 TROVE2P10155 538 aaKnown RBP eCLIP6.76□□□□□ -1.33
ERBB3-218ENST00000551176 ETS2P15036 469 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 FPR1P21462 350 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 PPIBP23284 216 aaKnown RBP6.76□□□□□ -1.33
ERBB3-218ENST00000551176 PRKAR1BP31321 381 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 HTR3AP46098 478 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 CLK1P49759 484 aaKnown RBP6.76□□□□□ -1.33
ERBB3-218ENST00000551176 ARFIP2P53365 341 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 CRYBA2P53672 197 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 PCBP3P57721 371 aaKnown RBP6.76□□□□□ -1.33
ERBB3-218ENST00000551176 OR2B6P58173 313 aa6.76□□□□□ -1.33
ERBB3-218ENST00000551176 DMTNQ08495 405 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms