RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 URADA6NGE7 173 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 FAM166BA8MTA8 275 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 NPIPA5E9PKD4 350 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 SPRY3O43610 288 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 ZNF500O60304 480 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 TSPAN2O60636 221 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 RSL1D1O76021 490 aaKnown RBP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 IGKV1D-16P01601 117 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 HLA-DQA2P01906 255 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 KLK1P06870 262 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 IL3P08700 152 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 RBP1P09455 135 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 SLC35E2P0CK97 266 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 ICAM2P13598 275 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 CPMP14384 443 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 ZNF24P17028 368 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 IMPDH1P20839 514 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 CNTFP26441 200 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 TIA1P31483 386 aaKnown RBP eCLIP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 PHBP35232 272 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 FRKP42685 505 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 CYB561P49447 251 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 SSR4P51571 173 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 CCNG1P51959 295 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 DLX5P56178 289 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 CLDN15P56746 228 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 FBXW4P57775 412 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 B3GALT5-AS1P59052 145 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 EGR4Q05215 589 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 LCP2Q13094 533 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 ALKBH1Q13686 389 aaKnown RBP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 PDE7AQ13946 482 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 NNATQ16517 81 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 SGO1Q5FBB7 561 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 PAGE2BQ5JRK9 111 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 TEX35Q5T0J7 233 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 PRAMEF20Q5VT98 475 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 CLEC6AQ6EIG7 209 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 DGAT2L7PQ6IED9 249 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 OR52E8Q6IFG1 317 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 FAM71E1Q6IPT2 247 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 NIPAL1Q6NVV3 410 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 PLXDC2Q6UX71 529 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 GFRALQ6UXV0 394 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 RNF165Q6ZSG1 346 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 C10orf107Q8IVU9 208 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 PRR22Q8IZ63 422 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 FBXW8Q8N3Y1 598 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 MREGQ8N565 214 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 CEP112Q8N8E3 955 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 RELL2Q8NC24 303 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 OR4N2Q8NGD1 307 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 OR9A2Q8NGT5 310 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 KIF18AQ8NI77 898 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 FAM57AQ8TBR7 257 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 ZNF675Q8TD23 568 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 ACMSDQ8TDX5 336 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 C2CD4CQ8TF44 421 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 NUDCD2Q8WVJ2 157 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 MED30Q96HR3 178 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 BTBD9Q96Q07 612 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 NODALQ96S42 347 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 SORT1Q99523 831 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 RSPO3Q9BXY4 272 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 EBPLQ9BY08 206 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 DEFB126Q9BYW3 111 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 BRF2Q9HAW0 419 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 PNPLA3Q9NST1 481 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 LYARQ9NX58 379 aaKnown RBP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 SELENONQ9NZV5 590 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 TXNDC16Q9P2K2 825 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 SEC14L3Q9UDX4 400 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 MTRF1LQ9UGC7 380 aaKnown RBP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 BAG5Q9UL15 447 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 NPIPA1Q9UND3 350 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 YARS2Q9Y2Z4 477 aaKnown RBP4.38□□□□□ -1.71
SCAF11-214ENST00000550893 PLLPQ9Y342 182 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 RAP2CQ9Y3L5 183 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 PLCE1Q9P212 2302 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 TLN2Q9Y4G6 2542 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 A0A1W2PPR1 153 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 FAM90A20PA6NIJ5 464 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 MYO1GB0I1T2 1018 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 KIF2AO00139 706 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 PSMD12O00232 456 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ANKRD28O15084 1053 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 LSM1O15116 133 aaKnown RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 TO15178 435 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 HNRNPRO43390 633 aaKnown RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ITM2AO43736 263 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 UGT2B11O75310 529 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 KRT38O76015 456 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ZFAND5O76080 213 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 CSTBP04080 98 aaKnown RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ABCB1P08183 1280 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 GSTA1P08263 222 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 FCGR2AP12318 317 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 CD1EP15812 388 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 SDC1P18827 310 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ABCD3P28288 659 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms