RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 CCR4P51679 360 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 SESN3P58005 492 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 CSNK2A1P68400 391 aaPredicted RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 HBA1P69905 142 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 RASGEF1BQ0VAM2 473 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 FAPQ12884 760 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 MAD2L1Q13257 205 aaPredicted RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 PDK3Q15120 406 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 STK11Q15831 433 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 NRF1Q16656 503 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 SMU1Q2TAY7 513 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ARHGAP11BQ3KRB8 267 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 SYT14P1Q58G82 188 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 C6orf136Q5SQH8 315 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 PDZK1Q5T2W1 519 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ABLIM2Q6H8Q1 611 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 TMPPEQ6ZT21 453 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 EIF3MQ7L2H7 374 aaKnown RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 GALNT5Q7Z7M9 940 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ATG4DQ86TL0 474 aaPredicted RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 KRTCAP2Q8N6L1 136 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 MAPK1IP1LQ8NDC0 245 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 FAM71CQ8NEG0 241 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ATP6V1C2Q8NEY4 427 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 OR5D16Q8NGK9 328 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 OR5AK3PQ8NH89 298 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 RFWD2Q8NHY2 731 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 AGR3Q8TD06 166 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 MIPOL1Q8TD10 442 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ZNF75CPQ92670 426 aaPredicted RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 NEUROG1Q92886 237 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ZNF524Q96C55 264 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 C3orf30Q96M34 536 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 HS6ST2Q96MM7 605 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 OR5B2Q96R09 309 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ZNF300Q96RE9 604 aaPredicted RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 C1orf50Q9BV19 199 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 MECRQ9BV79 373 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 LAT2Q9GZY6 243 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 SERHL2Q9H4I8 314 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ALG2Q9H553 416 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ACER3Q9NUN7 267 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 CISD1Q9NZ45 108 aaKnown RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 EMC3Q9P0I2 261 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 GIMAP2Q9UG22 337 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 PRSS50Q9UI38 385 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 SPIN1Q9Y657 262 aaPredicted RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 RNF103-CHMP3A0A140T963 221 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 SHISA9B4DS77 424 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 SULT2B1O00204 365 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 RNASET2O00584 256 aaKnown RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 ABCD4O14678 606 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 ANKRD28O15084 1053 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 DNPH1O43598 174 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 KIAA0513O60268 411 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 FCMRO60667 390 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 RAMP1O60894 148 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 ADAM11O75078 769 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 SKAP2O75563 359 aaPredicted RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 PMS2P2O95744 297 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 AGR2O95994 175 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 CSTAP01040 98 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 CD8AP01732 235 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 NUDT17P0C025 328 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 UBTFL6P0CB48 400 aaPredicted RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 G6PDP11413 515 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 PGCP20142 388 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 MATN1P21941 496 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 EDNRAP25101 427 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 PTAFRP25105 342 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 FKBP2P26885 142 aaKnown RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 ARRB2P32121 409 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 SOAT1P35610 550 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 APOBEC1P41238 236 aaKnown RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 CDH11P55287 796 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 CLDN8P56748 225 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 RPS26P62854 115 aaKnown RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 EMX2Q04743 252 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 MERTKQ12866 999 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 GPR68Q15743 365 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 AGAP6Q5VW22 663 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 FBXW9Q5XUX1 488 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 AP1ARQ63HQ0 302 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 TMEM108Q6UXF1 575 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 ZCCHC23Q6ZST2 131 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 C16orf62Q7Z3J2 963 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 C6orf120Q7Z4R8 191 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 MTDHQ86UE4 582 aaKnown RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 HIPK1Q86Z02 1210 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 ZNF100Q8IYN0 542 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 OR8J2Q8NGG1 315 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 TCP10LQ8TDR4 215 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 TUBGCP3Q96CW5 907 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 ZHX1-C8orf76Q96EF9 292 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 SLC35G5Q96KT7 338 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 ADAD1Q96M93 576 aaKnown RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 ZIM3Q96PE6 472 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 THUMPD3Q9BV44 507 aaKnown RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 QRSL1Q9H0R6 528 aaKnown RBP6.72□□□□□ -1.33
NEK3-201ENST00000550331 POLE3Q9NRF9 147 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms