RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	LUZP2	Q86TE4	346 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	CMIP	Q8IY22	773 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	EID3	Q8N140	333 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	FITM2	Q8N6M3	262 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	ZNF563	Q8TA94	476 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	OIT3	Q8WWZ8	545 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	LRRC37B	Q96QE4	947 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	OR5B2	Q96R09	309 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	ADAM19	Q9H013	955 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	ENKD1	Q9H0I2	346 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	OPN3	Q9H1Y3	402 aa	Predicted RBP	10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	RAD21L1	Q9H4I0	556 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	KCNJ16	Q9NPI9	418 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	ARL8B	Q9NVJ2	186 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	PACSIN3	Q9UKS6	424 aa		10.02	□□□□□ -0.81
RAB5B-208	ENST00000550283	C2CD3	Q4AC94	2353 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	PDZD2	O15018	2839 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	EVPLL	A8MZ36	301 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	C5orf58	C9J3I9	102 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	FAM47E-STBD1	D6RA91	191 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283		M0QX08	132 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283		M0R3H8	397 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	NME4	O00746	187 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	EEF1E1	O43324	174 aa	Known RBP	10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	ATP5H	O75947	161 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	THY1	P04216	161 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	ETS2	P15036	469 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	ADSL	P30566	484 aa	Predicted RBP	10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	CCKAR	P32238	428 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	PCGF2	P35227	344 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	CARD18	P57730	90 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	NCALD	P61601	193 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	BNIP1	Q12981	228 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	MYBPH	Q13203	477 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	SGCB	Q16585	318 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	VMAC	Q2NL98	169 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	MMEL1	Q495T6	779 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	SYT14P1	Q58G82	188 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	COQ5	Q5HYK3	327 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	DHRS4L2	Q6PKH6	230 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	MEX3B	Q6ZN04	569 aa	Known RBP	10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	C22orf34	Q6ZV56	151 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	ESPNL	Q6ZVH7	1005 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	NUFIP2	Q7Z417	695 aa	Known RBP	10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	GRINA	Q7Z429	371 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	P4HA3	Q7Z4N8	544 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	P3H2	Q8IVL5	708 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	SLC15A3	Q8IY34	581 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	CADM2	Q8N3J6	435 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	CNEP1R1	Q8N9A8	125 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	HIPK4	Q8NE63	616 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	PMM1	Q92871	262 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	MARVELD3	Q96A59	401 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	C3orf49	Q96BT1	292 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	ZNF775	Q96BV0	537 aa	Predicted RBP	10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	TM9SF2	Q99805	663 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	THUMPD1	Q9NXG2	353 aa	Known RBP	10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	CALML5	Q9NZT1	146 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	ZNF629	Q9UEG4	869 aa	Predicted RBP	10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	TMED7	Q9Y3B3	224 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	ZNF175	Q9Y473	711 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	CSMD2	Q7Z408	3487 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	CSMD1	Q96PZ7	3565 aa		10.01	□□□□□ -0.81
RAB5B-208	ENST00000550283	ITPR3	Q14573	2671 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	IGKV1D-42	A0A075B6H8	117 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	BBIP1	A8MTZ0	92 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	FAAH	O00519	579 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	SLC22A2	O15244	555 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	CCDC22	O60826	627 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	LYPD3	O95274	346 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	FES	P07332	822 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	PRKAR1B	P31321	381 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	SLC1A3	P43003	542 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	DIO1	P49895	249 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	EGR4	Q05215	589 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	LARS2	Q15031	903 aa	Known RBP	10	□□□□□ -0.81
RAB5B-208	ENST00000550283	SLC25A35	Q3KQZ1	300 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	C3orf33	Q6P1S2	294 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	ATG4D	Q86TL0	474 aa	Predicted RBP	10	□□□□□ -0.81
RAB5B-208	ENST00000550283	CCDC103	Q8IW40	242 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	ZNF610	Q8N9Z0	462 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	C11orf65	Q8NCR3	313 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	OR8J3	Q8NGG0	315 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	RP9	Q8TA86	221 aa	Known RBP	10	□□□□□ -0.81
RAB5B-208	ENST00000550283	RNF128	Q8TEB7	428 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	ZNF300	Q96RE9	604 aa	Predicted RBP	10	□□□□□ -0.81
RAB5B-208	ENST00000550283	GALNT8	Q9NY28	637 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	CHRNA9	Q9UGM1	479 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	IFT52	Q9Y366	437 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283	PKDREJ	Q9NTG1	2253 aa		10	□□□□□ -0.81
RAB5B-208	ENST00000550283		A0A1B0GWA3	101 aa		9.99	□□□□□ -0.81
RAB5B-208	ENST00000550283		A8MXE2	369 aa		9.99	□□□□□ -0.81
RAB5B-208	ENST00000550283	SYT5	O00445	386 aa		9.99	□□□□□ -0.81
RAB5B-208	ENST00000550283	DVL2	O14641	736 aa		9.99	□□□□□ -0.81
RAB5B-208	ENST00000550283	SS18L1	O75177	396 aa	Predicted RBP	9.99	□□□□□ -0.81
RAB5B-208	ENST00000550283	IL18BP	O95998	194 aa		9.99	□□□□□ -0.81
RAB5B-208	ENST00000550283	TFPI	P10646	304 aa		9.99	□□□□□ -0.81

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