RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ZNF517Q6ZMY9 492 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-209ENST00000550020 HIST3H2AQ7L7L0 130 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 JAZF1Q86VZ6 243 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 LRRC28Q86X40 367 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-209ENST00000550020 SPEM1Q8N4L4 309 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 TMEM99Q8N816 258 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 SYT14Q8NB59 555 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 FAM71CQ8NEG0 241 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 OR52E2Q8NGJ4 325 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 OR14A16Q8NHC5 309 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 ENKURQ8TC29 256 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 DOK4Q8TEW6 326 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 RLN3Q8WXF3 142 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 THRSPQ92748 146 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 HIST1H2ACQ93077 130 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 PTP4A1Q93096 173 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 KISS1RQ969F8 398 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-209ENST00000550020 LCORQ96JN0 433 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-209ENST00000550020 GPX7Q96SL4 187 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-209ENST00000550020 ZNF649Q9BS31 505 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 IER2Q9BTL4 223 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 MRI1Q9BV20 369 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 YIPF2Q9BWQ6 316 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 MFRPQ9BY79 579 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.22□□□□□ -1.09
TMEM116-209ENST00000550020 MIR1-1HGQ9H1L0 117 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 ERVMER34-1Q9H9K5 563 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 C14orf119Q9NWQ9 140 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 LRIT1Q9P2V4 623 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 COMMD3Q9UBI1 195 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 CHRNA9Q9UGM1 479 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 SRPK3Q9UPE1 567 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 NPFFR2Q9Y5X5 522 aa8.22□□□□□ -1.09
TMEM116-209ENST00000550020 PDE4DIPQ5VU43 2346 aa8.21□□□□□ -1.09
TMEM116-209ENST00000550020 TRAV1-2A0A0B4J238 106 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 A0A1W2PQ09 198 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 A0A1W2PQD3 144 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 FAM25AB3EWG3 89 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 FAM25CB3EWG5 89 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 FAM25GB3EWG6 89 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ZNF879B4DU55 563 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 J3QLW9 94 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 PDCD5O14737 125 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 TOX3O15405 576 aaPredicted RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 HCRTR1O43613 425 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 EIF4E2O60573 245 aaKnown RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 TRIM3O75382 744 aaPredicted RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 REM1O75628 298 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 CDC123O75794 336 aaPredicted RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 NTN1O95631 604 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 HLA-DQB1P01920 261 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 WNT1P04628 370 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 NGFRP08138 427 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 CLEC2LP0C7M8 214 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 GLB1P16278 677 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ZNF19P17023 458 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 IL12BP29460 328 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 DIO1P49895 249 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 AFF3P51826 1226 aaKnown RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SLC25A1P53007 311 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 TPTEP56180 551 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 RPS4XP62701 263 aaKnown RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 PITPNAQ00169 270 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 IL18Q14116 193 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 DOC2BQ14184 412 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 QPRTQ15274 297 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SMAD2Q15796 467 aaKnown RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ZNF79Q15937 498 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 DEFB133Q30KQ1 61 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SNAP47Q5SQN1 464 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SLC6A19Q695T7 634 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 GPR139Q6DWJ6 353 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 RPL22L1Q6P5R6 122 aaKnown RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 CNIH2Q6PI25 160 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ZC3H14Q6PJT7 736 aaKnown RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ARL9Q6T311 187 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 C5orf46Q6UWT4 87 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 THSD4Q6ZMP0 1018 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SLC29A4Q7RTT9 530 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 PRSS42Q7Z5A4 293 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ZAR1Q86SH2 424 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SFTPA2Q8IWL1 248 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SLC35F2Q8IXU6 374 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ZNF687Q8N1G0 1237 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 C10orf53Q8N6V4 93 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ZFP41Q8N8Y5 198 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 OR4N2Q8NGD1 307 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 OR5M3Q8NGP4 307 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ABHD4Q8TB40 342 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SNX33Q8WV41 574 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SENP5Q96HI0 755 aaPredicted RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 C4orf36Q96KX1 117 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 HSPA12BQ96MM6 686 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 CMTM3Q96MX0 182 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 UBL7Q96S82 380 aaPredicted RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SDHCQ99643 169 aaPredicted RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ATF6BQ99941 703 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 LAT2Q9GZY6 243 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 SPRTNQ9H040 489 aaPredicted RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 MIXL1Q9H2W2 232 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms