RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 OLIG3Q7RTU3 272 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 VPS37AQ8NEZ2 397 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 KBTBD8Q8NFY9 601 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 PHOSPHO1Q8TCT1 267 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 S100PBPQ96BU1 408 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 SLC35G5Q96KT7 338 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 CCDC115Q96NT0 180 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 OR51I1Q9H343 314 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 CHODLQ9H9P2 273 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 KLHL13Q9P2N7 655 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 BTNL2Q9UIR0 455 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 KCNE5Q9UJ90 142 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 ICAM5Q9UMF0 924 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 PCDHGB4Q9UN71 923 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 PRAMEF27A3QJZ7 478 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 GJE1A6NN92 205 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 ETV2O00321 342 aaPredicted RBP10.77□□□□□ -0.69
DDX54-206ENST00000549271 EFNA2O43921 213 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 OR12D1P0DN82 309 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 ITGA2P17301 1181 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 HNF1AP20823 631 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 GZMKP49863 264 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 P2RX1P51575 399 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 IRX1P78414 480 aaPredicted RBP10.77□□□□□ -0.69
DDX54-206ENST00000549271 FOXF1Q12946 379 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 P2RY6Q15077 328 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 ZNF141Q15928 474 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 SLC25A53Q5H9E4 307 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 TMEM201Q5SNT2 666 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 SEZ6L2Q6UXD5 910 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 ATG4DQ86TL0 474 aaPredicted RBP10.77□□□□□ -0.69
DDX54-206ENST00000549271 SLC43A2Q8N370 569 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 PIWIL2Q8TC59 973 aaKnown RBP10.77□□□□□ -0.69
DDX54-206ENST00000549271 GPR119Q8TDV5 335 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 ABHD3Q8WU67 409 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 HSD17B8Q92506 261 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 PROX1Q92786 737 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 NEURL3Q96EH8 262 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 REXO5Q96IC2 774 aaKnown RBP10.77□□□□□ -0.69
DDX54-206ENST00000549271 ATP6V1G3Q96LB4 118 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 OR52B2Q96RD2 323 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 INPP5KQ9BT40 448 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 NMUR2Q9GZQ4 415 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 C12orf49Q9H741 205 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 TMEM185BQ9H7F4 350 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 NGBQ9NPG2 151 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 CARD8Q9Y2G2 431 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 DTNAQ9Y4J8 743 aa10.77□□□□□ -0.69
DDX54-206ENST00000549271 GPC6Q9Y625 555 aaPredicted RBP10.77□□□□□ -0.69
DDX54-206ENST00000549271 CENPVL1A0A0U1RR11 272 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 STX11O75558 287 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 PRKD3O94806 890 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 NTN1O95631 604 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 FESP07332 822 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 YES1P07947 543 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 USF1P22415 310 aaPredicted RBP10.76□□□□□ -0.69
DDX54-206ENST00000549271 SHC1P29353 583 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 CDKN2CP42773 168 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
DDX54-206ENST00000549271 FUT5Q11128 374 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 GPR68Q15743 365 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 TOMM34Q15785 309 aaPredicted RBP10.76□□□□□ -0.69
DDX54-206ENST00000549271 NDUFAF6Q330K2 333 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 PDCD4Q53EL6 469 aaKnown RBP10.76□□□□□ -0.69
DDX54-206ENST00000549271 PDZK1Q5T2W1 519 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 NXNQ6DKJ4 435 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 ALKBH2Q6NS38 261 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 TNFAIP8L2Q6P589 184 aaPredicted RBP10.76□□□□□ -0.69
DDX54-206ENST00000549271 EPGNQ6UW88 154 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 SSX8Q7RTT4 187 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 NUFIP2Q7Z417 695 aaKnown RBP10.76□□□□□ -0.69
DDX54-206ENST00000549271 TUSC5Q8IXB3 177 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 ZNF525Q8N782 197 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 ZNF527Q8NB42 609 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 FBXO27Q8NI29 283 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 C10orf105Q8TEF2 133 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 XAGE5Q8WWM1 108 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 RAB8BQ92930 207 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 ZG16BQ96DA0 208 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 MRGPRX4Q96LA9 322 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 ADAD1Q96M93 576 aaKnown RBP10.76□□□□□ -0.69
DDX54-206ENST00000549271 OR52E6Q96RD3 313 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 SLC35A5Q9BS91 424 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 SRXN1Q9BYN0 137 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 ZNF350Q9GZX5 532 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 SAP130Q9H0E3 1048 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 COQ10BQ9H8M1 238 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 BCO1Q9HAY6 547 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 FAIMQ9NVQ4 179 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 CISD1Q9NZ45 108 aaKnown RBP10.76□□□□□ -0.69
DDX54-206ENST00000549271 MKLN1Q9UL63 735 aa10.76□□□□□ -0.69
DDX54-206ENST00000549271 PRKDCP78527 4128 aaKnown RBP10.76□□□□□ -0.69
DDX54-206ENST00000549271 A0A0G2JK05 382 aa10.75□□□□□ -0.69
DDX54-206ENST00000549271 LOC100289279A0A1B0GTE1 492 aa10.75□□□□□ -0.69
DDX54-206ENST00000549271 DPRXA6NFQ7 191 aa10.75□□□□□ -0.69
DDX54-206ENST00000549271 SERINC4A6NH21 518 aa10.75□□□□□ -0.69
DDX54-206ENST00000549271 CCDC154A6NI56 674 aa10.75□□□□□ -0.69
DDX54-206ENST00000549271 H3BNH8 94 aa10.75□□□□□ -0.69
DDX54-206ENST00000549271 GTPBP1O00178 669 aaKnown RBP10.75□□□□□ -0.69
DDX54-206ENST00000549271 HMGN4O00479 90 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms