RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 NUFIP2Q7Z417 695 aaKnown RBP14.07□□□□□ -0.16
DDX54-205ENST00000548786 SERPINA11Q86U17 422 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 PMM1Q92871 262 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 ZC3HAV1LQ96H79 300 aaKnown RBP14.07□□□□□ -0.16
DDX54-205ENST00000548786 SLC39A3Q9BRY0 314 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 CLEC4MQ9H2X3 399 aaPredicted RBP14.07□□□□□ -0.16
DDX54-205ENST00000548786 KLHL13Q9P2N7 655 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 OSGIN1Q9UJX0 560 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 ZNF232Q9UNY5 417 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 CHST2Q9Y4C5 530 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 SPIN1Q9Y657 262 aaPredicted RBP14.07□□□□□ -0.16
DDX54-205ENST00000548786 CCDC168Q8NDH2 2452 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 PRKD3O94806 890 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 PABPC4LP0CB38 370 aaKnown RBP14.06□□□□□ -0.16
DDX54-205ENST00000548786 EPXP11678 715 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 BMP2P12643 396 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 UGT2B10P36537 528 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 MDH1P40925 334 aaKnown RBP14.06□□□□□ -0.16
DDX54-205ENST00000548786 OR2B6P58173 313 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 SCARB2Q14108 478 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 RNPS1Q15287 305 aaKnown RBP14.06□□□□□ -0.16
DDX54-205ENST00000548786 CYP51A1Q16850 503 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 RUNDC3AQ59EK9 446 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 RNF220Q5VTB9 566 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 GTF2IRD2BQ6EKJ0 949 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 TMPPEQ6ZT21 453 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 GTF2IRD2Q86UP8 949 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 ZNF440Q8IYI8 595 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 SLC25A43Q8WUT9 341 aaPredicted RBP14.06□□□□□ -0.16
DDX54-205ENST00000548786 ZNF300Q96RE9 604 aaPredicted RBP14.06□□□□□ -0.16
DDX54-205ENST00000548786 CGREF1Q99674 301 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 MED18Q9BUE0 208 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 SPATA9Q9BWV2 254 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 PIF1Q9H611 641 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 GLRX2Q9NS18 164 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 IFT52Q9Y366 437 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 SPG11Q96JI7 2443 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 AKAP9Q99996 3911 aa14.06□□□□□ -0.16
DDX54-205ENST00000548786 ZC3H12DA2A288 527 aaKnown RBP14.05□□□□□ -0.16
DDX54-205ENST00000548786 FBP2O00757 339 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 THBS1P07996 1170 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 ACAA2P42765 397 aaKnown RBP14.05□□□□□ -0.16
DDX54-205ENST00000548786 SLC1A3P43003 542 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 HTR3AP46098 478 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 COPZ1P61923 177 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 CSNK2A1P68400 391 aaPredicted RBP14.05□□□□□ -0.16
DDX54-205ENST00000548786 RASGEF1BQ0VAM2 473 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 BNIP2Q12982 314 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 ADRM1Q16186 407 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 METTL21CQ5VZV1 264 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 ALKBH2Q6NS38 261 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 REEP3Q6NUK4 255 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 COMTD1Q86VU5 262 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 WFIKKN1Q96NZ8 548 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 RSPO3Q9BXY4 272 aaPredicted RBP14.05□□□□□ -0.16
DDX54-205ENST00000548786 LIME1Q9H400 295 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 BCL2L10Q9HD36 194 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 PLSCR4Q9NRQ2 329 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 RASSF1Q9NS23 344 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 C6orf203Q9P0P8 240 aaPredicted RBP14.05□□□□□ -0.16
DDX54-205ENST00000548786 NDRG3Q9UGV2 375 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 CORO2BQ9UQ03 480 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 TESMINQ9Y4I5 508 aa14.05□□□□□ -0.16
DDX54-205ENST00000548786 C16orf97H3BN30 126 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 CASKO14936 926 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 YES1P07947 543 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 GPX2P18283 190 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 SLC6A2P23975 617 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 CXCR1P25024 350 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 KLF10Q13118 480 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 TSC22D1Q15714 1073 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 GLIPR1L2Q4G1C9 344 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 PRAMEF8Q5VWM4 474 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 PRAMEF7Q5VXH5 474 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 WBP2NLQ6ICG8 309 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 STK32CQ86UX6 486 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 SNX32Q86XE0 403 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 DPP10Q8N608 796 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 DDIT4LQ96D03 193 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 ANKRD27Q96NW4 1050 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 DACH2Q96NX9 599 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 PSD2Q9BQI7 771 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 CCDC134Q9H6E4 229 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 ARMC7Q9H6L4 198 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 SAR1AQ9NR31 198 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 ELOVL5Q9NYP7 299 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 ARMCX1Q9P291 453 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 KLHL9Q9P2J3 617 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 ING1Q9UK53 422 aaPredicted RBP14.04□□□□□ -0.16
DDX54-205ENST00000548786 AKAP6Q13023 2319 aa14.04□□□□□ -0.16
DDX54-205ENST00000548786 LOC100653049A0A140TA62 436 aa14.03□□□□□ -0.16
DDX54-205ENST00000548786 ZNF814B7Z6K7 855 aa14.03□□□□□ -0.16
DDX54-205ENST00000548786 FAAHO00519 579 aa14.03□□□□□ -0.16
DDX54-205ENST00000548786 TPST1O60507 370 aa14.03□□□□□ -0.16
DDX54-205ENST00000548786 CYTIPO60759 359 aa14.03□□□□□ -0.16
DDX54-205ENST00000548786 RAMP1O60894 148 aa14.03□□□□□ -0.16
DDX54-205ENST00000548786 KRT34O76011 436 aa14.03□□□□□ -0.16
DDX54-205ENST00000548786 OPN1SWP03999 348 aa14.03□□□□□ -0.16
DDX54-205ENST00000548786 EDNRAP25101 427 aa14.03□□□□□ -0.16
DDX54-205ENST00000548786 DAZAP2Q15038 168 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms