RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TRIML2Q8N7C3 387 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 ZNF485Q8NCK3 441 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 KLHDC9Q8NEP7 349 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 OR1L6Q8NGR2 347 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 OR1B1Q8NGR6 318 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 TBCKQ8TEA7 893 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 GPX8Q8TED1 209 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 GLYATL2Q8WU03 294 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 SLCO2A1Q92959 643 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 EFHD2Q96C19 240 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 FBXO17Q96EF6 278 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 FAHD2AQ96GK7 314 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 ATP6V1G3Q96LB4 118 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 FAM218AQ96MZ4 157 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 TGS1Q96RS0 853 aaKnown RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 FAM173AQ9BQD7 235 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 TDRD3Q9H7E2 651 aaKnown RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 SCRT2Q9NQ03 307 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 TBC1D24Q9ULP9 559 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 PPP1R3CQ9UQK1 317 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 STARD10Q9Y365 291 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 AK6Q9Y3D8 172 aaKnown RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CSDC2Q9Y534 153 aaKnown RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 PEX16Q9Y5Y5 336 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CSNK1G3Q9Y6M4 447 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CEP152O94986 1710 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 NEXMIFQ5QGS0 1516 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 SYCP2Q9BX26 1530 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 CLSPNQ9HAW4 1339 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 CCDC182A6NF36 153 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 TUBAL3A6NHL2 446 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 C15orf61A6NNL5 157 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 SMIM1B2RUZ4 78 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 KIF2AO00139 706 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 PRKAB2O43741 272 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 FGF17O60258 216 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 RAMP3O60896 148 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ATP5LO75964 103 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 NADKO95544 446 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 AP2A1O95782 977 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 NPPAP01160 153 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 CRYAAP02489 173 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ERCC1P07992 297 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 FCGR3AP08637 254 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 HOXB7P09629 217 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 HSD17B1P14061 328 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 MSR1P21757 451 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ANXA13P27216 316 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 GNA11P29992 359 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 PPP2R1BP30154 601 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 RPS5P46782 204 aaKnown RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 NDST2P52849 883 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 CRYBB1P53674 252 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ATP12AP54707 1039 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 YWHAGP61981 247 aaKnown RBP eCLIP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ZNF85Q03923 595 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 RAB40BQ12829 278 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 GK3PQ14409 553 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 STK38Q15208 465 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 FAM189A2Q15884 450 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 GLYR1Q49A26 553 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 NKAIN1Q4KMZ8 207 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 DMRTC1Q5HYR2 192 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 DCST2Q5T1A1 773 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 TWF2Q6IBS0 349 aaKnown RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ENPP6Q6UWR7 440 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ADAMTSL5Q6ZMM2 481 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 C19orf35Q6ZS72 473 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 KCNMB4Q86W47 210 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 CCDC65Q8IXS2 484 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 GABRG1Q8N1C3 465 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 MTURNQ8N3F0 131 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 C15orf54Q8N8G6 183 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 SAMD12Q8N8I0 201 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 WDSUB1Q8N9V3 476 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 SDR9C7Q8NEX9 313 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 OR52B6Q8NGF0 335 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 OR13F1Q8NGS4 319 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 SPPL2AQ8TCT8 520 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 BADQ92934 168 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 KIAA1143Q96AT1 154 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 CXorf40BQ96DE9 158 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 NUS1Q96E22 293 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 PPP1R16AQ96I34 528 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ZNF578Q96N58 590 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 RCHY1Q96PM5 261 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 DUX3Q96PT4 197 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 CABLES2Q9BTV7 478 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 SPATA16Q9BXB7 569 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 DGCR6LQ9BY27 220 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 LIME1Q9H400 295 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 RNF41Q9H4P4 317 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 VCPKMTQ9H867 229 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 NHEJ1Q9H9Q4 299 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-210ENST00000547654 WDR41Q9HAD4 459 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 NMRAL1Q9HBL8 299 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 POPDC2Q9HBU9 364 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ADGRL4Q9HBW9 690 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 B3GAT2Q9NPZ5 323 aa3.55□□□□□ -1.84
SCAF11-210ENST00000547654 ZFP57Q9NU63 452 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms