RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 STK32CQ86UX6 486 aa14.18□□□□□ -0.14
DDX54-204ENST00000546898 ABHD3Q8WU67 409 aa14.18□□□□□ -0.14
DDX54-204ENST00000546898 SLC35B4Q969S0 331 aa14.18□□□□□ -0.14
DDX54-204ENST00000546898 GPATCH1Q9BRR8 931 aaKnown RBP14.18□□□□□ -0.14
DDX54-204ENST00000546898 POLDIP3Q9BY77 421 aaKnown RBP14.18□□□□□ -0.14
DDX54-204ENST00000546898 CLEC4MQ9H2X3 399 aaPredicted RBP14.18□□□□□ -0.14
DDX54-204ENST00000546898 FGFR1OP2Q9NVK5 253 aa14.18□□□□□ -0.14
DDX54-204ENST00000546898 KLHL9Q9P2J3 617 aa14.18□□□□□ -0.14
DDX54-204ENST00000546898 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.18□□□□□ -0.14
DDX54-204ENST00000546898 TESMINQ9Y4I5 508 aa14.18□□□□□ -0.14
DDX54-204ENST00000546898 SULT2B1O00204 365 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 SMAD9O15198 467 aaKnown RBP14.17□□□□□ -0.14
DDX54-204ENST00000546898 ZNF208O43345 1280 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 PGM3O95394 542 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 PMS2P2O95744 297 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 TFPIP10646 304 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 ETS2P15036 469 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 GPX2P18283 190 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 CCKARP32238 428 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 UGT2B10P36537 528 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 ARFIP2P53365 341 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 COPZ1P61923 177 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 ZNF311Q5JNZ3 666 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 DLEU7Q6UYE1 221 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 BEND4Q6ZU67 534 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 ADGRG3Q86Y34 549 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 MAL2Q969L2 176 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 ZHX1-C8orf76Q96EF9 292 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 PSD2Q9BQI7 771 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 CPPED1Q9BRF8 314 aaPredicted RBP14.17□□□□□ -0.14
DDX54-204ENST00000546898 TMEM38AQ9H6F2 299 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 BCO1Q9HAY6 547 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 RLIMQ9NVW2 624 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 OSGIN1Q9UJX0 560 aa14.17□□□□□ -0.14
DDX54-204ENST00000546898 TMED7-TICAM2A0A0A6YYA0 188 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 C16orf97H3BN30 126 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 CASKO14936 926 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 CYTIPO60759 359 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 YES1P07947 543 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 VIMP08670 466 aaKnown RBP14.16□□□□□ -0.14
DDX54-204ENST00000546898 CD1EP15812 388 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 TACR3P29371 465 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 ACAA2P42765 397 aaKnown RBP14.16□□□□□ -0.14
DDX54-204ENST00000546898 CDK6Q00534 326 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 RUNDC3AQ59EK9 446 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 ABLIM2Q6H8Q1 611 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 WBP2NLQ6ICG8 309 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 REEP3Q6NUK4 255 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 KRT73Q86Y46 540 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 TUSC5Q8IXB3 177 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 NFKBIDQ8NI38 313 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 DDIT4LQ96D03 193 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 SPATA5L1Q9BVQ7 753 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 ADAM19Q9H013 955 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 IKZF5Q9H5V7 419 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 ZNF226Q9NYT6 803 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 TRAPPC4Q9Y296 219 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 TMED7Q9Y3B3 224 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 OTOGQ6ZRI0 2925 aa14.16□□□□□ -0.14
DDX54-204ENST00000546898 IGHV3-15A0A0B4J1V0 119 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 ZNF724A8MTY0 619 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 FESP07332 822 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 GKN3PP0CG01 181 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 PPP3CBP16298 524 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 PRKAR1BP31321 381 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 GUCY1A3Q02108 690 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 RASGEF1BQ0VAM2 473 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 SCARB2Q14108 478 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 PDK3Q15120 406 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 EXOC3L2Q2M3D2 409 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 FBXW10Q5XX13 1052 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 CGB2Q6NT52 195 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 MTDHQ86UE4 582 aaKnown RBP14.15□□□□□ -0.14
DDX54-204ENST00000546898 RETREG3Q86VR2 466 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 C10orf111Q8N326 155 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 ARL5BQ96KC2 179 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 ANKRD27Q96NW4 1050 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 CGREF1Q99674 301 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 MED18Q9BUE0 208 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 OR10A4Q9H209 315 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 C12orf49Q9H741 205 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 TMEM181Q9P2C4 612 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 CHST2Q9Y4C5 530 aa14.15□□□□□ -0.14
DDX54-204ENST00000546898 TMEM72A0PK05 275 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 HRGP04196 525 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 SLC6A2P23975 617 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 RBBP4Q09028 425 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 NFYCQ13952 458 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 MAPRE2Q15555 327 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 COQ5Q5HYK3 327 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 DHRS4L2Q6PKH6 230 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 TFAP2EQ6VUC0 442 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 NUFIP2Q7Z417 695 aaKnown RBP14.14□□□□□ -0.15
DDX54-204ENST00000546898 CDC20BQ86Y33 519 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 CLIP4Q8N3C7 705 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 HIPK4Q8NE63 616 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 BHLHE22Q8NFJ8 381 aaPredicted RBP14.14□□□□□ -0.15
DDX54-204ENST00000546898 PIGXQ8TBF5 258 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 NINJ1Q92982 152 aa14.14□□□□□ -0.15
DDX54-204ENST00000546898 WFIKKN1Q96NZ8 548 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms