RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 GSK3BP49841 420 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 MFAP2P55001 183 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 ELAVL3Q14576 367 aaKnown RBP3.3□□□□□ -1.88
SNHG1-222ENST00000545308 ZIC1Q15915 447 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 PCK2Q16822 640 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 CFAP221Q4G0U5 840 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 ZSCAN25Q6NSZ9 544 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 RFWD3Q6PCD5 774 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 STAC2Q6ZMT1 411 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 TMEM17Q86X19 198 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 UBQLNLQ8IYU4 475 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 MYOCDQ8IZQ8 938 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 LINC01561Q8N1V8 128 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 BHLHE23Q8NDY6 225 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 FLVCR1-AS1Q8TAF5 88 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 CNIH3Q8TBE1 160 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 FNDC8Q8TC99 324 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 TBCKQ8TEA7 893 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 LRRC15Q8TF66 581 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 GTF3AQ92664 365 aaKnown RBP3.3□□□□□ -1.88
SNHG1-222ENST00000545308 MYLPFQ96A32 169 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 TADA1Q96BN2 335 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 PELI1Q96FA3 418 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 SH3YL1Q96HL8 342 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-222ENST00000545308 RIT2Q99578 217 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 NPAS2Q99743 824 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 FEM1AQ9BSK4 669 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 TMEM43Q9BTV4 400 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 NFKBIZQ9BYH8 718 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 OCR1Q9BZK8 76 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 ELL3Q9HB65 397 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-222ENST00000545308 SCRT2Q9NQ03 307 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 MRPL39Q9NYK5 338 aaKnown RBP3.3□□□□□ -1.88
SNHG1-222ENST00000545308 PIPOXQ9P0Z9 390 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 NYAP2Q9P242 653 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 RCOR3Q9P2K3 495 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-222ENST00000545308 CYTH4Q9UIA0 394 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 LCMT1Q9UIC8 334 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 CRLS1Q9UJA2 301 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 MGAT4AQ9UM21 535 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 WDR45Q9Y484 360 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 CPQQ9Y646 472 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 SLCO1B1Q9Y6L6 691 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 SPACA6W5XKT8 324 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 TANC1Q9C0D5 1861 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 COL4A4P53420 1690 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-222ENST00000545308 PKD1L2Q7Z442 2459 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 IGLV7-46A0A075B6I9 117 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-222ENST00000545308 RSPH10B2B2RC85 870 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 F5H6K3 240 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 NUDT14O95848 222 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 F10P00742 488 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 IGFBP1P08833 259 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-222ENST00000545308 RSPH10BP0C881 870 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 LAP3P28838 519 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 ADORA1P30542 326 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 GDI1P31150 447 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 HPCAL1P37235 193 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 GRIA1P42261 906 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 NOVA1P51513 510 aaKnown RBP3.29□□□□□ -1.88
SNHG1-222ENST00000545308 NTHL1P78549 312 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 PLOD1Q02809 727 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-222ENST00000545308 KLRC3Q07444 240 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 C17orf58Q2M2W7 97 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 EXOC3L2Q2M3D2 409 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 KCTD21Q4G0X4 260 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 MS4A13Q5J8X5 152 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 TPGS2Q68CL5 300 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 ACSM5Q6NUN0 579 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 REG3GQ6UW15 175 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 EFL1Q7Z2Z2 1120 aaKnown RBP3.29□□□□□ -1.88
SNHG1-222ENST00000545308 LRRTM1Q86UE6 522 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 SYT14Q8NB59 555 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 OR56B2PQ8NGI1 322 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 OR5D13Q8NGL4 314 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 FBXO32Q969P5 355 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 COQ2Q96H96 371 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 TGM7Q96PF1 710 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 DUX3Q96PT4 197 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 SLC30A2Q9BRI3 323 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 FGFBP2Q9BYJ0 223 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 API5Q9BZZ5 524 aaKnown RBP3.29□□□□□ -1.88
SNHG1-222ENST00000545308 IKZF5Q9H5V7 419 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 FN3KRPQ9HA64 309 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 SLC38A10Q9HBR0 1119 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 ZDHHC18Q9NUE0 388 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 UFSP2Q9NUQ7 469 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 SMOXQ9NWM0 555 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 NMRK1Q9NWW6 199 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 NUDT4Q9NZJ9 180 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 C6orf203Q9P0P8 240 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-222ENST00000545308 EPG5Q9HCE0 2579 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 ACACBO00763 2458 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 ATRXP46100 2492 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 EP300Q09472 2414 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-222ENST00000545308 MYH6P13533 1939 aa3.29□□□□□ -1.88
SNHG1-222ENST00000545308 BAZ2AQ9UIF9 1905 aaKnown RBP3.29□□□□□ -1.88
SNHG1-222ENST00000545308 FAM208BQ5VWN6 2430 aa3.28□□□□□ -1.88
SNHG1-222ENST00000545308 TRAV26-1A0A087WT03 109 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms