RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	JAK1	P23458	1154 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	ATP5A1	P25705	553 aa	Known RBP	5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	PPP2R1B	P30154	601 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	TIA1	P31483	386 aa	Known RBP eCLIP	5.99	□□□□□ -1.45	5e-14	■■■■□ 26
LDHA-223	ENST00000545215	ASMT	P46597	345 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	HTR6	P50406	440 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	PLA2G16	P53816	162 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	SLURP1	P55000	103 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	ERVK-8	P63133	956 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	EMX2	Q04743	252 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	ACTN3	Q08043	901 aa	Predicted RBP	5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	TBL3	Q12788	808 aa	Known RBP	5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	HEPACAM	Q14CZ8	416 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	ELAVL1	Q15717	326 aa	Known RBP	5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	FAM189A2	Q15884	450 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	SPDYA	Q5MJ70	313 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	CFAP161	Q6P656	301 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	CLEC2A	Q6UVW9	174 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	CYP20A1	Q6UW02	462 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	EPGN	Q6UW88	154 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215		Q6ZSR9	355 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	PRSS41	Q7RTY9	318 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	COMMD6	Q7Z4G1	85 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	LACC1	Q8IV20	430 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	PEX5L	Q8IYB4	626 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	FBXW8	Q8N3Y1	598 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	SMYD1	Q8NB12	490 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	ZCCHC10	Q8TBK6	192 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	AGR3	Q8TD06	166 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	SPDL1	Q96EA4	605 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	C11orf24	Q96F05	449 aa	Predicted RBP	5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	ZNF764	Q96H86	408 aa	Predicted RBP	5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	FCRL1	Q96LA6	429 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	BTBD9	Q96Q07	612 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	OR1F2P	Q96R84	312 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	F2RL3	Q96RI0	385 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	KCNA7	Q96RP8	456 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	CCT8L2	Q96SF2	557 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	SH3GL1	Q99961	368 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	MACROD1	Q9BQ69	325 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	PTDSS2	Q9BVG9	487 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	FAIM2	Q9BWQ8	316 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	NUF2	Q9BZD4	464 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	MEGF9	Q9H1U4	602 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	OR51B5	Q9H339	312 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	TUBB1	Q9H4B7	451 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	METTL17	Q9H7H0	456 aa	Predicted RBP	5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	TCF7L2	Q9NQB0	619 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	FGFR1OP2	Q9NVK5	253 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	DNAJB11	Q9UBS4	358 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	PSME2	Q9UL46	239 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	FIS1	Q9Y3D6	152 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	CCL27	Q9Y4X3	112 aa		5.99	□□□□□ -1.45
LDHA-223	ENST00000545215	SCN3A	Q9NY46	2000 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	GNG14	A0A1W2PPG7	69 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	ZNF860	A6NHJ4	632 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215		J3KTA2	159 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	SMAD9	O15198	467 aa	Known RBP	5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	PCDH7	O60245	1069 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	ZNF354A	O60765	605 aa	Predicted RBP	5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	CDC123	O75794	336 aa	Predicted RBP	5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	TBX6	O95947	436 aa	Predicted RBP	5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	FAM107A	O95990	144 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	PLAU	P00749	431 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	IDO1	P14902	403 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	BSG	P35613	385 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	BUD31	P41223	144 aa	Predicted RBP	5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	CPA2	P48052	419 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	MRPL19	P49406	292 aa	Known RBP	5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	PCYT1A	P49585	367 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	MAN2A2	P49641	1150 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	HLCS	P50747	726 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	MAPK12	P53778	367 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	AQP5	P55064	265 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	TAS2R50	P59544	299 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	RAB8A	P61006	207 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	STX1B	P61266	288 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	BTN3A2	P78410	334 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	HMGCS1	Q01581	520 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	ZNF763	Q0D2J5	394 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	SCGB2A2	Q13296	93 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	FHL3	Q13643	280 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	KIAA0040	Q15053	153 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	NSDHL	Q15738	373 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	EXT1	Q16394	746 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	GSTA3	Q16772	222 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	DEFB134	Q4QY38	66 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	SFT2D3	Q587I9	215 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	C6orf136	Q5SQH8	315 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	CCNYL2	Q5T2Q4	361 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	PAPD4	Q6PIY7	484 aa	Known RBP	5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	TMEM108	Q6UXF1	575 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	R3HCC1L	Q7Z5L2	792 aa	Known RBP	5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	ANKRD37	Q7Z713	158 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	LUZP2	Q86TE4	346 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	GPR180	Q86V85	440 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	ZNF595	Q8IYB9	648 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	SLC5A8	Q8N695	610 aa		5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	C1orf52	Q8N6N3	182 aa	Known RBP	5.98	□□□□□ -1.45
LDHA-223	ENST00000545215	ACOT4	Q8N9L9	421 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms