RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 UGT2A3Q6UWM9 527 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 LRRC17Q8N6Y2 441 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 FAM76AQ8TAV0 307 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 PIGXQ8TBF5 258 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 FAM120BQ96EK7 910 aaKnown RBP8.13□□□□□ -1.11
CHD4-212ENST00000545083 CHMP6Q96FZ7 201 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 LRRC37BQ96QE4 947 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 STACQ99469 402 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 SLC6A7Q99884 636 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 THUMPD3Q9BV44 507 aaKnown RBP8.13□□□□□ -1.11
CHD4-212ENST00000545083 KATNB1Q9BVA0 655 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 OR11A1Q9GZK7 315 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 HOXD1Q9GZZ0 328 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 PIGUQ9H490 435 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 NARFLQ9H6Q4 476 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 ACSS3Q9H6R3 686 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 DUSP22Q9NRW4 184 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 UPB1Q9UBR1 384 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 DTNAQ9Y4J8 743 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 FLVCR1Q9Y5Y0 555 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 KMT2CQ8NEZ4 4911 aaKnown RBP8.12□□□□□ -1.11
CHD4-212ENST00000545083 SH3PXD2BA1X283 911 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 H3BNH8 94 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 EIF4E2O60573 245 aaKnown RBP8.12□□□□□ -1.11
CHD4-212ENST00000545083 WNT11O96014 354 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 CRYAAP02489 173 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 CECR9P0C854 216 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 IMPDH1P20839 514 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 MPGP29372 298 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 THBS4P35443 961 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 KHKP50053 298 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 UBA52P62987 128 aaKnown RBP8.12□□□□□ -1.11
CHD4-212ENST00000545083 TUBA1BP68363 451 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 TUBA4AP68366 448 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 LCP2Q13094 533 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 KIAA0040Q15053 153 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 ADRM1Q16186 407 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 IMPG1Q17R60 797 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 TBRG1Q3YBR2 411 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 DCST2Q5T1A1 773 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 PDZK1Q5T2W1 519 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 ANKRD16Q6P6B7 361 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 KLHL24Q6TFL4 600 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 TUBA1AQ71U36 451 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 MYPOPQ86VE0 399 aaPredicted RBP8.12□□□□□ -1.11
CHD4-212ENST00000545083 CDK20Q8IZL9 346 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 ZFP28Q8NHY6 868 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 ST8SIA1Q92185 356 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 MRPL24Q96A35 216 aaKnown RBP8.12□□□□□ -1.11
CHD4-212ENST00000545083 ZNF764Q96H86 408 aaPredicted RBP8.12□□□□□ -1.11
CHD4-212ENST00000545083 CCDC106Q9BWC9 280 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 RACGAP1Q9H0H5 632 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 CDC42EP4Q9H3Q1 356 aaKnown RBP8.12□□□□□ -1.11
CHD4-212ENST00000545083 TPK1Q9H3S4 243 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 GSTO2Q9H4Y5 243 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 TNFRSF12AQ9NP84 129 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 CTPS2Q9NRF8 586 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 ZCCHC3Q9NUD5 404 aaKnown RBP8.12□□□□□ -1.11
CHD4-212ENST00000545083 ACER3Q9NUN7 267 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 TREM2Q9NZC2 230 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 TMEM216Q9P0N5 145 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 KCNE5Q9UJ90 142 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 GRIP1Q9Y3R0 1128 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 CCL27Q9Y4X3 112 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 PCDHB14Q9Y5E9 798 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 SAR1BQ9Y6B6 198 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 WNK1Q9H4A3 2382 aa8.12□□□□□ -1.11
CHD4-212ENST00000545083 TRIM49D1C9J1S8 452 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 NR5A2O00482 541 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 TBX19O60806 448 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 BCAS1O75363 584 aaPredicted RBP8.11□□□□□ -1.11
CHD4-212ENST00000545083 CYP7B1O75881 506 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 RSL1D1O76021 490 aaKnown RBP8.11□□□□□ -1.11
CHD4-212ENST00000545083 PMS2P2O95744 297 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 CELA3BP08861 270 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 HKR1P10072 659 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 GAAP10253 952 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 DDX5P17844 614 aaKnown RBP8.11□□□□□ -1.11
CHD4-212ENST00000545083 SLC1A3P43003 542 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 MAGEA8P43361 318 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 PKNOX1P55347 436 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 H3F3AP84243 136 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 IL1RL1Q01638 556 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 TGFBR3Q03167 851 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 PDE7AQ13946 482 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 ELFN2Q5R3F8 820 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 FAHD2BQ6P2I3 314 aaPredicted RBP8.11□□□□□ -1.11
CHD4-212ENST00000545083 OLIG3Q7RTU3 272 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 TRIM46Q7Z4K8 759 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 SPATA21Q7Z572 469 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 ZIC4Q8N9L1 334 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 CLHC1Q8NHS4 586 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 SLC25A43Q8WUT9 341 aaPredicted RBP8.11□□□□□ -1.11
CHD4-212ENST00000545083 ANP32BQ92688 251 aaKnown RBP8.11□□□□□ -1.11
CHD4-212ENST00000545083 ARL8AQ96BM9 186 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 PPCDCQ96CD2 204 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 ZHX1-C8orf76Q96EF9 292 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 FAHD2AQ96GK7 314 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 BOD1Q96IK1 185 aa8.11□□□□□ -1.11
CHD4-212ENST00000545083 JMJD8Q96S16 334 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms