RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 EIF1BO60739 113 aaKnown RBP10.54□□□□□ -0.72
HDAC4-216ENST00000544989 CYTIPO60759 359 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 TFPIP10646 304 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 ETS2P15036 469 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 SHC1P29353 583 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 DIO1P49895 249 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 KRTAP10-9P60411 292 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 FAM27E3Q08E93 113 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 EPS8Q12929 822 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 PDK3Q15120 406 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 GTDC1Q4AE62 458 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 GCNT6Q5T4J0 391 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 SSX8Q7RTT4 187 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 MTDHQ86UE4 582 aaKnown RBP10.54□□□□□ -0.72
HDAC4-216ENST00000544989 ZNF610Q8N9Z0 462 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 ROBO4Q8WZ75 1007 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 CNOT9Q92600 299 aaKnown RBP10.54□□□□□ -0.72
HDAC4-216ENST00000544989 AURKBQ96GD4 344 aaPredicted RBP10.54□□□□□ -0.72
HDAC4-216ENST00000544989 TMEM19Q96HH6 336 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 SPATA9Q9BWV2 254 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 SRXN1Q9BYN0 137 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 EVA1AQ9H8M9 152 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 BCO1Q9HAY6 547 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 NPHS2Q9NP85 383 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 CTPS2Q9NRF8 586 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 DCTN4Q9UJW0 460 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 ZNF443Q9Y2A4 671 aaPredicted RBP10.54□□□□□ -0.72
HDAC4-216ENST00000544989 GPR52Q9Y2T5 361 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 NDUFAF1Q9Y375 327 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 ABCA4P78363 2273 aa10.54□□□□□ -0.72
HDAC4-216ENST00000544989 TMED7-TICAM2A0A0A6YYA0 188 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 A0A1W2PNR3 127 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 PRORSD1PA6NEY8 169 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 CLDN24A6NM45 220 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 GPR171O14626 319 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 CNOT4O95628 575 aaKnown RBP10.53□□□□□ -0.72
HDAC4-216ENST00000544989 CD1EP15812 388 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 HOXB9P17482 250 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-216ENST00000544989 SLC6A2P23975 617 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 CXCR1P25024 350 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 RASGEF1BQ0VAM2 473 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 P2RY6Q15077 328 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 MAPK11Q15759 364 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 EXOC3L2Q2M3D2 409 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 ZNF311Q5JNZ3 666 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 WBP2NLQ6ICG8 309 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 REEP3Q6NUK4 255 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 CDC20BQ86Y33 519 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 ADGRG3Q86Y34 549 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 DPP10Q8N608 796 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 STEAP2Q8NFT2 490 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 PIGXQ8TBF5 258 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 ABHD3Q8WU67 409 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 ZNF607Q96SK3 696 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 KLHL4Q9C0H6 718 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 TMEM38AQ9H6F2 299 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 SLC52A3Q9NQ40 469 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-216ENST00000544989 CLEC4AQ9UMR7 237 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 TMED7Q9Y3B3 224 aa10.53□□□□□ -0.72
HDAC4-216ENST00000544989 IGKV3D-15A0A087WSY6 115 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 ATP8B1O43520 1251 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 BCAS1O75363 584 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-216ENST00000544989 SERPINB7O75635 380 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 PGM3O95394 542 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 C1QCP02747 245 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 FESP07332 822 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 ARAFP10398 606 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 GPX2P18283 190 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 PSMB1P20618 241 aaKnown RBP10.52□□□□□ -0.73
HDAC4-216ENST00000544989 CRYGSP22914 178 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 DNASE1P24855 282 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 PRKAR1BP31321 381 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 SLC35A1P78382 337 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 CDK6Q00534 326 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 PAGE3Q5JUK9 113 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 ZNF836Q6ZNA1 936 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 GALNT5Q7Z7M9 940 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 SLC30A8Q8IWU4 369 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 TUSC5Q8IXB3 177 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 ZNF524Q96C55 264 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 WFIKKN1Q96NZ8 548 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 PSD2Q9BQI7 771 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 NAA11Q9BSU3 229 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-216ENST00000544989 POTEKPQ9BYX7 375 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 ADAM19Q9H013 955 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 ZNF385DQ9H6B1 395 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 SLC25A37Q9NYZ2 338 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 VAPAQ9P0L0 249 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 TMEM181Q9P2C4 612 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 ST6GALNAC2Q9UJ37 374 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 OSGIN1Q9UJX0 560 aa10.52□□□□□ -0.73
HDAC4-216ENST00000544989 TRBV5-3A0A0A0MS03 114 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 SMAD9O15198 467 aaKnown RBP10.51□□□□□ -0.73
HDAC4-216ENST00000544989 NPPAP01160 153 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 HRGP04196 525 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 GPIP06744 558 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 TACR3P29371 465 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 DNAJA1P31689 397 aaKnown RBP10.51□□□□□ -0.73
HDAC4-216ENST00000544989 NR1H2P55055 460 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms