RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	TBX5	Q99593	518 aa		12.02	□□□□□ -0.49
CPSF7-223	ENST00000544669	LRRN3	Q9H3W5	708 aa		12.02	□□□□□ -0.49
CPSF7-223	ENST00000544669	KLHL1	Q9NR64	748 aa		12.02	□□□□□ -0.49
CPSF7-223	ENST00000544669	CHRNA9	Q9UGM1	479 aa		12.02	□□□□□ -0.49
CPSF7-223	ENST00000544669	SPATA2	Q9UM82	520 aa		12.02	□□□□□ -0.49
CPSF7-223	ENST00000544669	MOK	Q9UQ07	419 aa		12.02	□□□□□ -0.49
CPSF7-223	ENST00000544669	CLCA3P	Q9Y6N3	262 aa		12.02	□□□□□ -0.49
CPSF7-223	ENST00000544669	TRBV23OR9-2	A0A075B6M9	112 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	C7orf66	A4D0T2	115 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	OR5K3	A6NET4	321 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	SULT1B1	O43704	296 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	CBX7	O95931	251 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	UCHL1	P09936	223 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	TYRP1	P17643	537 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	STOM	P27105	288 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	MAPK3	P27361	379 aa	Predicted RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	LCN1	P31025	176 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	RCVRN	P35243	200 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	THBS2	P35442	1172 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	ACAA2	P42765	397 aa	Known RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	DIO1	P49895	249 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	IGLV3-21	P80748	117 aa	Predicted RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	CRYZ	Q08257	329 aa	Known RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	SERTAD2	Q14140	314 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	CDK5R1	Q15078	307 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	NTRK2	Q16620	822 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	FAM69A	Q5T7M9	428 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	FAAH2	Q6GMR7	532 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	THSD4	Q6ZMP0	1018 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	ZNF782	Q6ZMW2	699 aa	Predicted RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669		Q6ZSR6	202 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	ABI3BP	Q7Z7G0	1075 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669		Q8N9G6	341 aa	Predicted RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	ZNF527	Q8NB42	609 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	OR6C4	Q8NGE1	309 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	GRHL3	Q8TE85	626 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	CNOT9	Q92600	299 aa	Known RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	UPRT	Q96BW1	309 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	PGLYRP3	Q96LB9	341 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	FYTTD1	Q96QD9	318 aa	Known RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	SLITRK2	Q9H156	845 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	MED20	Q9H944	212 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	EMC7	Q9NPA0	242 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	NRIP3	Q9NQ35	241 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	MRTO4	Q9UKD2	239 aa	Known RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	SIRT4	Q9Y6E7	314 aa	Predicted RBP	12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	RNF215	Q9Y6U7	377 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	MAU2	Q9Y6X3	613 aa		12.01	□□□□□ -0.49
CPSF7-223	ENST00000544669	TRAV27	A0A087WT01	109 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669		A0A087WUJ7	227 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669		A0A0B4J293	547 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669		A0A1B0GVI7	797 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	HSPB2	A8KAH6	182 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	HR	O43593	1189 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	RFPL3	O75679	317 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	ZNF432	O94892	652 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	COL9A1	P20849	921 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	ADH7	P40394	386 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	GRK6	P43250	576 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	GDI2	P50395	445 aa	Known RBP	12	□□□□□ -0.49
CPSF7-223	ENST00000544669	VSX2	P58304	361 aa	Predicted RBP	12	□□□□□ -0.49
CPSF7-223	ENST00000544669	HTRA3	P83110	453 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	PSG6	Q00889	435 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	ID2	Q02363	134 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	FAM53B	Q14153	422 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	EXOSC7	Q15024	291 aa	Known RBP	12	□□□□□ -0.49
CPSF7-223	ENST00000544669	CCDC85B	Q15834	202 aa	Predicted RBP	12	□□□□□ -0.49
CPSF7-223	ENST00000544669	HSPB2	Q16082	182 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12	□□□□□ -0.49
CPSF7-223	ENST00000544669	SLC35F2	Q8IXU6	374 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	UBE2J2	Q8N2K1	259 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	ZNF614	Q8N883	585 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	OR52E2	Q8NGJ4	325 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	CCL4L1	Q8NHW4	92 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	RNF31	Q96EP0	1072 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	DGAT2	Q96PD7	388 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	GPX7	Q96SL4	187 aa	Predicted RBP	12	□□□□□ -0.49
CPSF7-223	ENST00000544669	MCCC2	Q9HCC0	563 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	ST6GALNAC2	Q9UJ37	374 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	CENPVL1	A0A0U1RR11	272 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	ZNF860	A6NHJ4	632 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	SLC9B1P1	A6NJY1	282 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669		A8MV72	311 aa	Predicted RBP	12	□□□□□ -0.49
CPSF7-223	ENST00000544669	SCAMP1	O15126	338 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	PRAF2	O60831	178 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	OR2B3	O76000	313 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	NTN1	O95631	604 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	EGF	P01133	1207 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	IFNA16	P05015	189 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	EPX	P11678	715 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	CTSE	P14091	401 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	C4BPB	P20851	252 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	RPL4	P36578	427 aa	Known RBP	12	□□□□□ -0.49
CPSF7-223	ENST00000544669	TPMT	P51580	245 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	HSD17B7	P56937	341 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	SCAND1	P57086	179 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	OR12D2	P58182	307 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	EMC4	Q5J8M3	183 aa		12	□□□□□ -0.49
CPSF7-223	ENST00000544669	UBE2NL	Q5JXB2	153 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms