RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CPAMD8Q8IZJ3 1885 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 TACC2O95359 2948 aa8.65□□□□□ -1.03
YBX3-215ENST00000544504 TRAV17A0A0B4J275 112 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 SH3PXD2BA1X283 911 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 C7orf72A4D263 438 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ETV2O00321 342 aaPredicted RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 OIP5O43482 229 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 NME2P1O60361 137 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 TPST2O60704 377 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 TRIM3O75382 744 aaPredicted RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 RASAL1O95294 804 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ADAP00813 363 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 IGF2P01344 180 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 SP1P08047 785 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 GSTM3P21266 225 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 NME2P22392 152 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 CXCR1P25024 350 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 HTR2AP28223 471 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 PEX2P28328 305 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ADH6P28332 368 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 APOBEC1P41238 236 aaKnown RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 LIMS1P48059 325 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 RNF144AP50876 292 aaPredicted RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 ALDH3A2P51648 485 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 POLR2HP52434 150 aaKnown RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 UGT2B15P54855 530 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 DSCR4P56555 118 aaPredicted RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 HOXC5Q00444 222 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 PLAURQ03405 335 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 DAG1Q14118 895 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 QPRTQ15274 297 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 TAF11Q15544 211 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 EXOC3L2Q2M3D2 409 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 NDUFAF6Q330K2 333 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 SLC25A53Q5H9E4 307 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ZNF468Q5VIY5 522 aaPredicted RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 PRAMEF20Q5VT98 475 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 TTC33Q6PID6 262 aaPredicted RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 CBLN3Q6UW01 205 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 IGFL3Q6UXB1 125 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ZNF730Q6ZMV8 503 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 MBOAT2Q6ZWT7 520 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 CBR4Q8N4T8 237 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ATG16L2Q8NAA4 619 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 MDS2Q8NDY4 140 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 OR10G2Q8NGC3 310 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 OR4C15Q8NGM1 316 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 PRR7Q8TB68 274 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 PIGXQ8TBF5 258 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 WFDC6Q9BQY6 131 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 TMEM43Q9BTV4 400 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ADAM19Q9H013 955 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 DSN1Q9H410 356 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ZFP64Q9NPA5 681 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 CTPS2Q9NRF8 586 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 SERINC1Q9NRX5 453 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ANKRD10Q9NXR5 420 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 USE1Q9NZ43 259 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 ERRFI1Q9UJM3 462 aaPredicted RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 SLC7A7Q9UM01 511 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 MED31Q9Y3C7 131 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 MRPS18CQ9Y3D5 142 aaKnown RBP8.64□□□□□ -1.03
YBX3-215ENST00000544504 U3KQV3 271 aa8.64□□□□□ -1.03
YBX3-215ENST00000544504 A0A087WUJ7 227 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 LINC01387J3KSC0 135 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 ADAM10O14672 748 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 OR10H3O60404 316 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 BCAS1O75363 584 aaPredicted RBP8.63□□□□□ -1.03
YBX3-215ENST00000544504 PDGFAP04085 211 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 ZNF17P17021 662 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 DPP4P27487 766 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 SRD5A2P31213 254 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 CLK1P49759 484 aaKnown RBP8.63□□□□□ -1.03
YBX3-215ENST00000544504 TNFSF10P50591 281 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 MERTKQ12866 999 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 COX10Q12887 443 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 MRPL49Q13405 166 aaKnown RBP8.63□□□□□ -1.03
YBX3-215ENST00000544504 RAPSNQ13702 412 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 INPP5JQ15735 1006 aaPredicted RBP8.63□□□□□ -1.03
YBX3-215ENST00000544504 LRRC36Q1X8D7 754 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 ZNF766Q5HY98 468 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 OTUD3Q5T2D3 398 aaPredicted RBP8.63□□□□□ -1.03
YBX3-215ENST00000544504 LPCAT4Q643R3 524 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 BICRALQ6AI39 1079 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 SPINK14Q6IE38 97 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 PODNL1Q6PEZ8 512 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 MDGA2Q7Z553 956 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 ZNF227Q86WZ6 799 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 OR2M7Q8NG81 312 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 OR4K5Q8NGD3 323 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 OR52J3Q8NH60 311 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 SLC7A13Q8TCU3 470 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 GNPDA2Q8TDQ7 276 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 SLC25A43Q8WUT9 341 aaPredicted RBP8.63□□□□□ -1.03
YBX3-215ENST00000544504 TMEM239Q8WW34 195 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 C3orf49Q96BT1 292 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 C1GALT1C1Q96EU7 318 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 SCMH1Q96GD3 660 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 JSRP1Q96MG2 331 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms