RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 DOCK7Q96N67 2140 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 A0A0G2JNJ9 132 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 A0A1B0GWA3 101 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 GJE1A6NN92 205 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 IFNA14P01570 189 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 CEACAM8P31997 349 aaPredicted RBP13.54□□□□□ -0.24
CD9-210ENST00000543916 TIMP3P35625 211 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 SMSP52788 366 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 NCALDP61601 193 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 CEACAM7Q14002 265 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 PON3Q15166 354 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 SGCBQ16585 318 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 SYT14P1Q58G82 188 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 RIPPLY2Q5TAB7 128 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 MRGPRGQ86SM5 289 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 ATG4DQ86TL0 474 aaPredicted RBP13.54□□□□□ -0.24
CD9-210ENST00000543916 RANBP3LQ86VV4 465 aaPredicted RBP13.54□□□□□ -0.24
CD9-210ENST00000543916 CCDC71Q8IV32 467 aaPredicted RBP13.54□□□□□ -0.24
CD9-210ENST00000543916 LSMEM1Q8N8F7 131 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 OR52E4Q8NGH9 312 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 FNDC9Q8TBE3 224 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 SLC25A43Q8WUT9 341 aaPredicted RBP13.54□□□□□ -0.24
CD9-210ENST00000543916 OSTF1Q92882 214 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 WNT2BQ93097 391 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 DNAJA3Q96EY1 480 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 OR5B2Q96R09 309 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 MCHR1Q99705 422 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 ZNF559Q9BR84 538 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 SRXN1Q9BYN0 137 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 TAS2R1Q9NYW7 299 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 Q9UFV3 132 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 BAG5Q9UL15 447 aa13.54□□□□□ -0.24
CD9-210ENST00000543916 SPIN1Q9Y657 262 aaPredicted RBP13.54□□□□□ -0.24
CD9-210ENST00000543916 ZC3H12DA2A288 527 aaKnown RBP13.53□□□□□ -0.24
CD9-210ENST00000543916 SLC22A20A6NK97 555 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 SERPINA1P01009 418 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 TFPIP10646 304 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 CXCR1P25024 350 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 SLC7A1P30825 629 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 MSX2P35548 267 aaPredicted RBP13.53□□□□□ -0.24
CD9-210ENST00000543916 CARD18P57730 90 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 BNIP2Q12982 314 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 OR1Q1Q15612 314 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 FXNQ16595 210 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 PDSS1Q5T2R2 415 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 GLYATQ6IB77 296 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 TSPYL5Q86VY4 417 aaPredicted RBP13.53□□□□□ -0.24
CD9-210ENST00000543916 CARM1Q86X55 608 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 ZNF808Q8N4W9 903 aaPredicted RBP13.53□□□□□ -0.24
CD9-210ENST00000543916 PROX1Q92786 737 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 FAM162AQ96A26 154 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 SDCCAG3Q96C92 435 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 TPD52L3Q96J77 140 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 ARL5BQ96KC2 179 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 TRIM2Q9C040 744 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 RPS6KB2Q9UBS0 482 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 SH3GLB1Q9Y371 365 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 ZNF175Q9Y473 711 aa13.53□□□□□ -0.24
CD9-210ENST00000543916 CPSF4LA6NMK7 179 aaKnown RBP13.52□□□□□ -0.25
CD9-210ENST00000543916 ZNF208O43345 1280 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 FMO6PO60774 539 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 AQP8O94778 261 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 ZNF682O95780 498 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 IL2RAP01589 272 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 OR1E2P47887 323 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 SELENOWP63302 87 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 ZNF239Q16600 458 aaKnown RBP13.52□□□□□ -0.25
CD9-210ENST00000543916 ENTPD8Q5MY95 495 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 PPP4R4Q6NUP7 873 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 C6orf89Q6UWU4 347 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 CBLL1Q75N03 491 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 P4HA3Q7Z4N8 544 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 VTCN1Q7Z7D3 282 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 LIX1LQ8IVB5 337 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 GCNT2Q8N0V5 402 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 SLC7A6OSQ96CW6 309 aaPredicted RBP13.52□□□□□ -0.25
CD9-210ENST00000543916 TM9SF2Q99805 663 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 PCDHAC1Q9H158 963 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 C1orf21Q9H246 121 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 ADPRHL2Q9NX46 363 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 PAQR5Q9NXK6 330 aaPredicted RBP13.52□□□□□ -0.25
CD9-210ENST00000543916 COQ3Q9NZJ6 369 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 SLC9A8Q9Y2E8 581 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 MED12LQ86YW9 2145 aa13.52□□□□□ -0.25
CD9-210ENST00000543916 A0A0B4J2E0 115 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 A0A1B0GX12 115 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 HSPB2A8KAH6 182 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 ARPC2O15144 300 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 RCBTB2O95199 551 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 SYNGR4O95473 234 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 THY1P04216 161 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 TMIGD3P0DMS9 266 aaPredicted RBP13.51□□□□□ -0.25
CD9-210ENST00000543916 IMPDH2P12268 514 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 KLK2P20151 261 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 AGAP20933 346 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 CHRNB4P30926 498 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 CLK1P49759 484 aaKnown RBP13.51□□□□□ -0.25
CD9-210ENST00000543916 DIO1P49895 249 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 CDH12P55289 794 aa13.51□□□□□ -0.25
CD9-210ENST00000543916 FOXF2Q12947 444 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms