RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 KPTNQ9Y664 436 aa4.03□□□□□ -1.76
SNHG1-219ENST00000542112 DLEC1Q9Y238 1755 aa4.03□□□□□ -1.76
SNHG1-219ENST00000542112 COL11A2P13942 1736 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-219ENST00000542112 BRCA1P38398 1863 aaKnown RBP4.03□□□□□ -1.77
SNHG1-219ENST00000542112 FOCADQ5VW36 1801 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 OTOFQ9HC10 1997 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 TRBV11-1A0A0K0K1C0 115 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 A0A1B0GUH1 482 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 HYKKA2RU49 373 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 LRIT2A6NDA9 550 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 AGAP14A8MT82 685 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 MAGEB17A8MXT2 336 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 PROB1E7EW31 1015 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GFYI3L273 518 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GPR31O00270 319 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 FOXE1O00358 373 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 NME4O00746 187 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GNGT2O14610 69 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 PPP1R2P9O14990 202 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ADAMTS3O15072 1205 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GALR3O60755 368 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ICOSLGO75144 302 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 STK16O75716 305 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RHBDL1O75783 438 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 SCELO95171 688 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 CLDN9O95484 217 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GLP2RO95838 553 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 SLC25A27O95847 323 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ONECUT2O95948 504 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 FGBP02675 491 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 HIST1H2ABP04908 130 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 IL5P05113 134 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 SRPRAP08240 638 aaKnown RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 F7P08709 466 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 PRR35P0CG20 571 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GTF2F2P13984 249 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 MTHFD2P13995 350 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ETS1P14921 441 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ITGB5P18084 799 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GABRB1P18505 474 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 PGAM1P18669 254 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GGT1P19440 569 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 TYMPP19971 482 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 TBPP20226 339 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 TPSB2P20231 275 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 AGXTP21549 392 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 SDHBP21912 280 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 SLC6A2P23975 617 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 IFNGR2P38484 337 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 NAA10P41227 235 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 MAP2K4P45985 399 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GPR4P46093 362 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RABIFP47224 123 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 OR3A1P47881 315 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GPR15P49685 360 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 PPT1P50897 306 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 DGKEP52429 567 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 EMP2P54851 167 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ATP5IP56385 69 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 OR2B8PP59922 312 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ERVFC1-1P60608 527 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RPS8P62241 208 aaKnown RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 LSM6P62312 80 aaKnown RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RANP62826 216 aaKnown RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RPL19P84098 196 aaKnown RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ROM1Q03395 351 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 SPOCK1Q08629 439 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RASGEF1BQ0VAM2 473 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 MRPL49Q13405 166 aaKnown RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 TPBGQ13641 420 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GTF2H2Q13888 395 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RUNX2Q13950 521 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 DPYSL3Q14195 570 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 PDCD1Q15116 288 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RHEBQ15382 184 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 SHHQ15465 462 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 TPSAB1Q15661 275 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 DUOXA1Q1HG43 343 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 HNRNPA1L2Q32P51 320 aaKnown RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 AGKQ53H12 422 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 COL5A1-AS1Q5SY13 56 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 TSTD2Q5T7W7 516 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RPUSD3Q6P087 351 aaKnown RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GTF2H2CQ6P1K8 395 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 DNAJC24Q6P3W2 148 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 IL27RAQ6UWB1 636 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 SCIMPQ6UWF3 145 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 B3GNT9Q6UX72 402 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 DEF8Q6ZN54 512 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ZCCHC23Q6ZST2 131 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 LANCL3Q6ZV70 420 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 CBLL1Q75N03 491 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 GAREM2Q75VX8 874 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 SLC35D2Q76EJ3 337 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 ERN2Q76MJ5 926 aaKnown RBP4.02□□□□□ -1.77
SNHG1-219ENST00000542112 HIST3H2AQ7L7L0 130 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 LINGO2Q7L985 606 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 CLEC14AQ86T13 490 aa4.02□□□□□ -1.77
SNHG1-219ENST00000542112 RTN4RL1Q86UN2 441 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms