RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 CLUP10909 449 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 NAT2P11245 290 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 ACTR1BP42025 376 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 VASPP50552 380 aaPredicted RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 PCBP4P57723 403 aaKnown RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 SMIM11AP58511 58 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 ACTR1AP61163 376 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 RPS7P62081 194 aaKnown RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 DUSP2Q05923 314 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 KRT33BQ14525 404 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 LASP1Q14847 261 aaKnown RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 PGGHGQ32M88 737 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 ZNF658BQ4V348 819 aaPredicted RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 SHEQ5VZ18 495 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 BTN2A1Q7KYR7 527 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 NRMQ8IXM6 262 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 LRRC56Q8IYG6 542 aaPredicted RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 LINC00518Q8N0U6 118 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 OR10Z1Q8NGY1 313 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 MAFAQ8NHW3 353 aaPredicted RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 RAB7BQ96AH8 199 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 SLC35G5Q96KT7 338 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 SAMD8Q96LT4 415 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 PRAP1Q96NZ9 151 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 ERMAPQ96PL5 475 aaPredicted RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 C8orf33Q9H7E9 229 aaPredicted RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 SYNPO2LQ9H987 977 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 IFT46Q9NQC8 304 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 PTTG3PQ9NZH4 202 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 P2RX2Q9UBL9 471 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 RCE1Q9Y256 329 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 RNF215Q9Y6U7 377 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 CXorf51AA0A1B0GTR3 108 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 FAM74A7A6NL05 159 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 CHURC1-FNTBB4DL54 471 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 LINC01387J3KSC0 135 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 J3QRE1 110 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 SIX6O95475 246 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 BCKDHBP21953 392 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 HTR1FP30939 366 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 RPL3P39023 403 aaKnown RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 GDNFP39905 211 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 TSPAN31Q12999 210 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 ETFDHQ16134 617 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 FAM74A3Q4VXF1 159 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 STPG1Q5TH74 334 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 KLHDC8AQ8IYD2 350 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 LINC01555Q8NAE3 123 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 OR10H4Q8NGA5 316 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 OR4E2Q8NGC2 313 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 OR2L2Q8NH16 312 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 OR5W2Q8NH69 310 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 TMEM255BQ8WV15 326 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 EFCAB11Q9BUY7 163 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 TEX101Q9BY14 249 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 GLIPR2Q9H4G4 154 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 PHPT1Q9NRX4 125 aaPredicted RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 ZCCHC3Q9NUD5 404 aaKnown RBP8.44□□□□□ -1.06
THBS3-211ENST00000541990 BABAM2Q9NXR7 383 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 SPHK1Q9NYA1 384 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 MGAT4CQ9UBM8 478 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 KIF25Q9UIL4 384 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 FBXL4Q9UKA2 621 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 SEC16AO15027 2179 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 SCN3AQ9NY46 2000 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 CACNA1HO95180 2353 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 KIAA1549LQ6ZVL6 1849 aa8.44□□□□□ -1.06
THBS3-211ENST00000541990 PLSCR5A0PG75 271 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 IRGMA1A4Y4 181 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 PRSS38A1L453 326 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 ANXA2P2A6NMY6 339 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 HNRNPCL2B2RXH8 293 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 ARPC1BO15143 372 aaKnown RBP8.43□□□□□ -1.06
THBS3-211ENST00000541990 IFNA16P05015 189 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 ANXA7P20073 488 aaKnown RBP8.43□□□□□ -1.06
THBS3-211ENST00000541990 ACADLP28330 430 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 BSGP35613 385 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 PPM1FP49593 454 aaPredicted RBP8.43□□□□□ -1.06
THBS3-211ENST00000541990 CCR8P51685 355 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 UBE2MP61081 183 aaKnown RBP8.43□□□□□ -1.06
THBS3-211ENST00000541990 PPP1CAP62136 330 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 ZP2Q05996 745 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 ACSM1Q08AH1 577 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 SNTB2Q13425 540 aaKnown RBP8.43□□□□□ -1.06
THBS3-211ENST00000541990 HDDC2Q7Z4H3 204 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 OR52B4Q8NGK2 314 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 HAVCR2Q8TDQ0 301 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 GNPDA2Q8TDQ7 276 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 KAT2AQ92830 837 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 PTP4A1Q93096 173 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 FOPNLQ96NB1 174 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 FAIM2Q9BWQ8 316 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 SGPP1Q9BX95 441 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 SNRNP200O75643 2136 aaKnown RBP8.43□□□□□ -1.06
THBS3-211ENST00000541990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.43□□□□□ -1.06
THBS3-211ENST00000541990 L7N2F9 121 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 ZGLP1P0C6A0 271 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 GAAP10253 952 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 GCGRP47871 477 aa8.43□□□□□ -1.06
THBS3-211ENST00000541990 MRPS21P82921 87 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms