RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 KHDRBS2Q5VWX1 349 aaKnown RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 Q6ZSR6 202 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 HSD11B1LQ7Z5J1 315 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 ADCK2Q7Z695 626 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 IQCHQ86VS3 1027 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 C17orf64Q86WR6 236 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 EIF4E3Q8N5X7 224 aaKnown RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 FAM98AQ8NCA5 519 aaKnown RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 OR4C6Q8NH72 309 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 GLYATL1Q969I3 302 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 TMEM203Q969S6 136 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 LCORQ96JN0 433 aaPredicted RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 SECISBP2Q96T21 854 aaKnown RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 TREX2Q9BQ50 279 aaPredicted RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 SLC17A9Q9BYT1 436 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 DNTTIP1Q9H147 329 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 ABCG4Q9H172 646 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 PLEKHA1Q9HB21 404 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 GALNT9Q9HCQ5 603 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 RDH8Q9NYR8 311 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 TAS2R8Q9NYW2 309 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 EXO1Q9UQ84 846 aaKnown RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 DNMT3AQ9Y6K1 912 aaPredicted RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 PCM1Q15154 2024 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 CCDC88CQ9P219 2028 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 hCG_1807616A0A1W2PRN6 198 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 DAPL1A0PJW8 107 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 UBE2QL1A1L167 161 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 POM121BA6NF01 834 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 IGLON5A6NGN9 336 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 CYSRT1A8MQ03 144 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 HMSDA8MTL9 139 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 HMGN4O00479 90 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 SCAMP1O15126 338 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 AKR7A2O43488 359 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 VEGFDO43915 354 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 FZD7O75084 574 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 DNAJB6O75190 326 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 PIAS2O75928 621 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 SOX14O95416 240 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 PAK4O96013 591 aaPredicted RBP9.63□□□□□ -0.87
CHFR-219ENST00000541341 B3GALT4O96024 378 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 TP53P04637 393 aaPredicted RBP9.63□□□□□ -0.87
CHFR-219ENST00000541341 FHP07954 510 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 RAB40ALP0C0E4 278 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 CLEC2LP0C7M8 214 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 ALPPL2P10696 532 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 BMP7P18075 431 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 ELK1P19419 428 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 HNRNPA2B1P22626 353 aaKnown RBP9.63□□□□□ -0.87
CHFR-219ENST00000541341 AKT2P31751 481 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 EVI2BP34910 448 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 RORAP35398 523 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 GAS1P54826 345 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 PCBP4P57723 403 aaKnown RBP9.63□□□□□ -0.87
CHFR-219ENST00000541341 TBPL1P62380 186 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 S100A12P80511 92 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 HOXC5Q00444 222 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 CFHR1Q03591 330 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 TGM3Q08188 693 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 FGL2Q14314 439 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 ZXDCQ2QGD7 858 aaPredicted RBP9.63□□□□□ -0.87
CHFR-219ENST00000541341 DEFB133Q30KQ1 61 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 BCL2L15Q5TBC7 163 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 PRAMEF13Q5VWM6 474 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 ARSKQ6UWY0 536 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 C3P1Q6ZMU1 363 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 OVCH1Q7RTY7 1134 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 OVCH2Q7RTZ1 564 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 HSD17B13Q7Z5P4 300 aaPredicted RBP9.63□□□□□ -0.87
CHFR-219ENST00000541341 ZER1Q7Z7L7 766 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 HORMAD2Q8N7B1 307 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 TP53I13Q8NBR0 393 aaPredicted RBP9.63□□□□□ -0.87
CHFR-219ENST00000541341 MORN4Q8NDC4 146 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 GPR32P1Q8NGA4 272 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 IFI44Q8TCB0 444 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 RAB40AQ8WXH6 277 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 TRMT61AQ96FX7 289 aaKnown RBP9.63□□□□□ -0.87
CHFR-219ENST00000541341 RAB11FIP5Q9BXF6 653 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 ABCG8Q9H221 673 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 CXorf36Q9H7Y0 433 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 ZFP64Q9NPA5 681 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 PRDM9Q9NQV7 894 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 NUDT15Q9NV35 164 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 TAAR2Q9P1P5 351 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 RHCGQ9UBD6 479 aa9.63□□□□□ -0.87
CHFR-219ENST00000541341 NUP214P35658 2090 aaPredicted RBP9.62□□□□□ -0.87
CHFR-219ENST00000541341 LY6G6EA0A0G2JKS1 128 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 TRAPPC13A5PLN9 417 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 OR6C65A6NJZ3 312 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 A8MX80 341 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 K7ESM1 405 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 L7N2F9 121 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 WWP2O00308 870 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 GPR171O14626 319 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 SURF4O15260 269 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 GPR39O43194 453 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 GPRIN2O60269 458 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 CLEC3AO75596 197 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 ETHE1O95571 254 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms