RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CLEC6AQ6EIG7 209 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 KLHL17Q6TDP4 642 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 PIGWQ7Z7B1 504 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 MTDHQ86UE4 582 aaKnown RBP6.39□□□□□ -1.39
YBX3-209ENST00000540747 ZNF100Q8IYN0 542 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 PIAS4Q8N2W9 510 aaPredicted RBP6.39□□□□□ -1.39
YBX3-209ENST00000540747 RIBC1Q8N443 379 aaPredicted RBP6.39□□□□□ -1.39
YBX3-209ENST00000540747 ANKRD42Q8N9B4 389 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 C1orf162Q8NEQ5 155 aaPredicted RBP6.39□□□□□ -1.39
YBX3-209ENST00000540747 ATP6V1C2Q8NEY4 427 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 CLHC1Q8NHS4 586 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 MGARPQ8TDB4 240 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 SLC25A43Q8WUT9 341 aaPredicted RBP6.39□□□□□ -1.39
YBX3-209ENST00000540747 CCDC126Q96EE4 140 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 C1orf159Q96HA4 380 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 SORCS2Q96PQ0 1159 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 OR5B2Q96R09 309 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 CCDC106Q9BWC9 280 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 ACTRT3Q9BYD9 372 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 NMUR2Q9GZQ4 415 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 LAT2Q9GZY6 243 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 IQCGQ9H095 443 aaKnown RBP6.39□□□□□ -1.39
YBX3-209ENST00000540747 SERHL2Q9H4I8 314 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 CCDC134Q9H6E4 229 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 SLC17A5Q9NRA2 495 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 ZCCHC3Q9NUD5 404 aaKnown RBP6.39□□□□□ -1.39
YBX3-209ENST00000540747 ACER3Q9NUN7 267 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 TAS2R16Q9NYV7 291 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 EMC3Q9P0I2 261 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 BAIAP2L1Q9UHR4 511 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 DCTN4Q9UJW0 460 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 NUP214P35658 2090 aaPredicted RBP6.38□□□□□ -1.39
YBX3-209ENST00000540747 A0A1W2PR80 420 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 TMEM120BA0PK00 339 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 SERINC4A6NH21 518 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 ATP6V1G2-DDX39BF2Z307 99 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 H3BNH8 94 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 M0R1B8 84 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 SLC28A1O00337 649 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 SCAMP2O15127 329 aaKnown RBP6.38□□□□□ -1.39
YBX3-209ENST00000540747 PLIN3O60664 434 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 BCAS1O75363 584 aaPredicted RBP6.38□□□□□ -1.39
YBX3-209ENST00000540747 PMS2P2O95744 297 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 NUDT14O95848 222 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 GUSBP08236 651 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 LAMP1P11279 417 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 UBL4AP11441 157 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 NEFHP12036 1026 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 ZNF23P17027 643 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 ATP6V1C1P21283 382 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 APOBEC3AP31941 199 aaPredicted RBP6.38□□□□□ -1.39
YBX3-209ENST00000540747 ASMTP46597 345 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 PDLIM4P50479 330 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 RPL38P63173 70 aaKnown RBP6.38□□□□□ -1.39
YBX3-209ENST00000540747 CSNK2A1P68400 391 aaPredicted RBP6.38□□□□□ -1.39
YBX3-209ENST00000540747 CHRNEQ04844 493 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 CHRNB3Q05901 458 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 CBFBQ13951 182 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 GGTLC2Q14390 218 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 SQLEQ14534 574 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 CR1LQ2VPA4 569 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 UGT3A2Q3SY77 523 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 TNFAIP8L3Q5GJ75 292 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 PDZK1Q5T2W1 519 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 KANK2Q63ZY3 851 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 OR7E24Q6IFN5 339 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 SZRD1Q7Z422 152 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 CNPY4Q8N129 248 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 C17orf78Q8N4C9 275 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 RFLNBQ8N5W9 214 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 OR7A2PQ8NGA2 310 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 OR56A1Q8NGH5 318 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 OR52E4Q8NGH9 312 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 SFXN5Q8TD22 340 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 CKAP2Q8WWK9 683 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 OR5P2Q8WZ92 322 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 JADE3Q92613 823 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 APH1AQ96BI3 265 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 ARL5BQ96KC2 179 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 FOXN4Q96NZ1 517 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 ZNF317Q96PQ6 595 aaPredicted RBP6.38□□□□□ -1.39
YBX3-209ENST00000540747 SDF2Q99470 211 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 CHODLQ9H9P2 273 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 PPCSQ9HAB8 311 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 OXSMQ9NWU1 459 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 ASB6Q9NWX5 421 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 SH3BP4Q9P0V3 963 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 LGALS13Q9UHV8 139 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 POU2F3Q9UKI9 436 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 NOSIPQ9Y314 301 aaKnown RBP6.38□□□□□ -1.39
YBX3-209ENST00000540747 TMED5Q9Y3A6 229 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 TRAF6Q9Y4K3 522 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 DNAJC15Q9Y5T4 150 aa6.38□□□□□ -1.39
YBX3-209ENST00000540747 HEATR1Q9H583 2144 aaKnown RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 PRKDCP78527 4128 aaKnown RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 LOC390937A0A1W2PQ73 354 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 CIB4A0PJX0 185 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 GTPBP1O00178 669 aaKnown RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 SULT2B1O00204 365 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 GPR171O14626 319 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms